Abrus precatorius (Indian licorice): 113862617
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Entry
113862617 CDS
T07330
Name
(RefSeq) pre-mRNA-splicing factor prp12 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113862617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aprc03021
]
113862617
03041 Spliceosome [BR:
aprc03041
]
113862617
03036 Chromosome and associated proteins [BR:
aprc03036
]
113862617
Transcription machinery [BR:
aprc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
113862617
Spliceosome [BR:
aprc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
113862617
Complex B
113862617
Complex C
U2 SnRNP specific factors
113862617
Chromosome and associated proteins [BR:
aprc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
113862617
TFTC complex
113862617
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
113862617
NCBI-ProteinID:
XP_027351494
UniProt:
A0A8B8L9S9
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MAVSEEECSSAKPGPSSPSSSSRYYLSKCVLRGSVVLQVLYAHIRSPSSYDVVFGKETSI
ELVVIDEDGNVQSVCDQPVFGTIKDLAVLPWNENFRSRDPQLWGKDLLVATSDSGKLSLL
TFCNEMHRFFPVTHIQLSNPGNTRDLPGRMLAVDSSGSFIAVSAFEDRLALFSLSTASGD
IIDERIVYPSESEGIASTSRSIQRTSIRGTIWSMCFISQDSRQPSKEHNPVLAVILNRRG
ALLNELLLLEWNIKARKIFVISQCVEAGPLAHDIVEVPNSGGLAFLFRAGDVLLMDLRDH
RNPSSVCKTNLNFLPNAMEEQNYVEDSCKLHDVDDERFSVAACALLELSDFDPMCIDSDN
GGANSGYKYICSWSWEPGNNKDPRMIFCVDTGEFFMIEVFIDSEGPKVNLSECLYKGLPC
KTLLWVEGGYLAALVEMGDGVILKLEDGRLCYTNPIQNIAPILDMAVVDYHDEKHGQIFA
CCGVAPEGSLRITRNGINVEKLHRTASIYQGVTGTWTVRMRVTDLYHSFLVLSFVEETRI
LSVGLSFTDVTDSVGFQPNVCTLACGLVNDGLLVQIHQSTVKLCLPTKAAHSEGIPLSSP
ICTSWCPDNVNISLGAVGHNFIVVSTSNPCFLFILGVRLLSAYQYEIYEMQHLVLQNELS
CISIPGQKKEQKQSNSSISPKNDSCTSSFQSGVDVNKTFVIGTHRPSVEIWSFAPDGGVT
VAACGTISLTNTVGTAISGCVPQDVRLVVVDKYYVLAGLRNGMLLRFEWPAESSPSPINV
VDTALSSINLVNSVTHAFDKRNDLPCTLQLIAIRRIGITPVFLVPLSDTLDADIIALSDR
PWLLHSARHGLSYTSISFQPSTHVTPVCSVECPKGILFVADNSLHLVEMVHSKRLNMQKF
HLEGTPRKVLYHNESKMLLVMRTELNCGTCLSDVCCVDPFSGSVLSSFRFELGETGKSME
LVRIGSEQVLVVGTSLSSGPAIMPSGEAESCKGRLLVLCLDHVQNSDSGSMTFCSKAGSS
SQKTSPFHEIVAYAPEQLSSSSLGSSPDDNSSDGIKLDENEVWQFRLACATRWQGMALAI
CPYLDRYFLASAGNTFYVCGFPNDNPQRVRRYAMGRTRFMITSLTAHFSRIAVGDCRDGI
LLFSYHEEARKLEQLYCDPALRLVADCILMDADTAVVSDRKGSIAVLCTDHWEENASPEC
NLTLSCTYFMAEVAMSIRKGSYSYRLPADDVLQGGNGPKTSVDSLQNTIIASTLLGSIIT
FIPLSREEYELLEAVQARLVVHHLTAPVLGNDHNEFRSRENPVGVPKILDGDMLTQFLEL
TSMQQKIILCSEPPDMVKSSLKPLLPPHVPVNQVVQLLERVHYALN
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttccgaagaagaatgctcttcggcgaagcctggtccctcttcgccttcctcc
tcctcgcgttactacctctctaagtgcgttctcagaggaagcgtcgttcttcaggtcctc
tacgctcacattcgttctccatcttcttacgacgtcgtttttggcaaggagacatctatt
gaattggtggtcattgatgaggatggtaatgttcaatctgtttgtgatcaacctgttttt
ggcaccatcaaagatcttgctgtgttgccctggaatgagaattttcgttcacgtgatccc
cagttgtggggtaaagaccttttggttgctacatctgattctgggaagctgtctttgctc
acattttgcaatgaaatgcacaggttctttcctgtaacacacattcaactgtccaatcct
ggaaacacaagggatcttcctggaagaatgcttgcagttgattccagtggttcttttatt
gctgtcagtgcttttgaagatcggctggctcttttctctttgtcaacagccagtggtgat
ataattgatgagagaatagtatatccttctgagagtgaagggattgcgagtacttccaga
agcatccagagaacgagcatacgtggtaccatttggagcatgtgctttatttcacaagat
tccagacaaccaagcaaagagcataatcctgtgttggctgttattttaaataggagagga
gcacttctaaatgaattgctattattggaatggaatattaaagcacgtaaaatctttgtt
atttctcagtgtgttgaagctgggcctctggcacatgacattgttgaagttccaaattct
ggtggacttgcatttctattcagggctggtgatgttctcttaatggatcttagagatcat
cgcaacccatcttctgtctgtaagacaaacttaaactttttacccaatgccatggaagag
cagaattatgtggaagactcttgtaaattacatgatgttgatgatgaacgctttagtgtt
gctgcctgtgctttgttggagctgagtgattttgatcctatgtgcatagacagtgataat
ggtggtgctaattctggttacaagtacatatgttcgtggagttgggaacctggaaataat
aaagatcctaggatgatcttctgtgtagatactggggaattttttatgatcgaagttttt
attgattctgaaggccctaaagttaatctgtctgagtgtctctataaaggactaccttgt
aaaacacttttgtgggttgaaggtggatatctagctgcccttgtagaaatgggggatggt
gtgatcctgaaattggaagatggaaggctatgttatacaaatcctattcaaaacattgca
ccaatcttggatatggcagttgtggattatcatgatgagaagcatggtcaaatatttgct
tgctgtggtgtggcacctgaggggtcattaaggattactcggaatggtattaatgtagaa
aaactccataggactgcttctatatatcaaggggtaactggtacttggactgtacgaatg
agagttactgatttgtatcattcttttctagttctatcatttgttgaggagaccagaata
ttgtcagttggcttaagttttactgacgtcactgattcagttggtttccaacctaatgtc
tgtacgttggcatgtggccttgtgaatgatggtttgcttgttcagatccatcaatctact
gttaagctttgtttgcccactaaggctgctcattctgaaggtatccctttatcctctcct
atttgcacatcttggtgtccagacaatgtgaatatcagtttgggggcagttgggcataat
ttcatagttgtgtcaacctctaatccgtgctttttgtttatccttggggttagattgcta
tcagcttatcaatatgaaatttatgaaatgcaacatttggtactgcagaatgaattatca
tgcatttccatccctggacaaaaaaaagagcaaaaacaatcaaattcatccatttcacca
aaaaatgatagttgcacctcttcttttcaaagtggagtggatgtcaataaaacctttgtt
attggcacacataggccttctgtggaaatttggtcttttgcaccagatggaggagttaca
gtagctgcttgtgggacaatttcattaacaaatacagtggggactgctataagtggctgt
gtacctcaagatgtacggcttgtagttgttgataagtattatgttcttgctggattgagg
aatggaatgctccttcgctttgagtggccggcagaatcatctccatcaccaataaatgtg
gtggatactgctttatcttctattaatttggtaaattctgtgactcatgcttttgacaag
agaaatgaccttccttgcacgcttcaattgattgctattcgtcgcattggcattactcca
gttttcttggtgcccctgagtgacacacttgatgctgatataattgctttgagtgatagg
ccttggctgttgcatagtgcaagacacggcctttcctatacttctatctcatttcaacca
tccacacatgtgactcctgtatgctctgttgagtgtccaaaaggaatattatttgttgca
gacaacagtttacatctggtggagatggtccacagcaagagacttaatatgcagaagttt
catttagagggcactccacggaaggttctgtatcacaatgaaagcaagatgttgcttgtg
atgaggactgaactgaattgtggtacatgtttgtctgatgtatgttgtgtggatcccttt
agtgggtcagtactgtcatcttttagatttgaacttggagaaacaggaaaatccatggaa
ttagtaagaattggaagtgagcaggtgcttgtggttggaactagtctgtcttctggtcca
gccataatgcccagtggtgaggctgagagttgcaagggtcgtcttcttgttctctgcctt
gatcatgtgcaaaattcagatagtggctcaatgacgttctgttccaaggcaggttcatca
tctcaaaaaacttctccattccatgaaattgttgcatatgctcctgaacagctatcgagc
agtagccttggcagtagccctgatgataatagttctgatggcatcaaacttgatgaaaat
gaagtttggcagtttcgactggcttgtgcaactagatggcagggaatggcacttgcaatc
tgtccttatcttgatcgttacttcttggcatctgccggcaatactttctatgtttgcggt
ttcccaaatgacaatccccaaagagtgaggaggtatgctatgggaaggacgcgtttcatg
ataacatctttgactgcacatttttctagaattgctgttggtgattgtcgtgatggtatc
cttctattttcttatcatgaggaagcaagaaaattagagcaactttactgtgatccagca
ctgaggttagtcgctgattgcattctcatggatgctgatacagctgttgtttcagatcgt
aaaggaagcattgctgttttatgtacagatcattgggaagaaaatgcaagtccagaatgc
aacttgacattaagctgcacatatttcatggcagaggtagccatgagcatcaggaagggc
tcatattcatacagacttccagctgatgatgttttgcaaggtggcaatggccccaagaca
agtgttgattcactacaaaatactattattgctagtactctgttaggaagcataataacc
ttcatccctttatcaagggaagaatatgagctcttggaagctgtgcaagcaagacttgtt
gtccatcatttgactgcgcctgttcttggaaatgatcataatgagtttcgcagtcgtgaa
aatccagttggagtacccaagatacttgatggtgacatgttgacccagtttctggagttg
acgagcatgcagcaaaagatcattttgtgttctgagccaccagatatggttaaatcaagt
ttgaagccattactacccccccatgttcctgtaaatcaggtggttcaacttcttgaacga
gttcattatgctctgaactaa
DBGET
integrated database retrieval system
