Abrus precatorius (Indian licorice): 113863401
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Entry
113863401 CDS
T07330
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113863401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aprc03041
]
113863401
03009 Ribosome biogenesis [BR:
aprc03009
]
113863401
Enzymes [BR:
aprc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113863401
Spliceosome [BR:
aprc03041
]
Complex A
U2 snRNP components
U2 related factors
113863401
Complex B
113863401
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
113863401
Ribosome biogenesis [BR:
aprc03009
]
Eukaryotic type
90S particles
Helicases
113863401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
DEAD
Helicase_C
AAA_22
AAA_19
ABC_tran
ResIII
nSTAND3
SRP54
FtsK_SpoIIIE
AAA_7
AAA_30
AAA_33
T2SSE
AAA_29
NACHT
Motif
Other DBs
NCBI-GeneID:
113863401
NCBI-ProteinID:
XP_027352770
UniProt:
A0A8B8L967
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MGTERKRKVSLFDVVDDSVAKMTKSNGGVNNSVANSLINRWTAKPYSQRYFEILEKRKTL
PVWHQKDEFFQTLKDNQTLILVGETGSGKTTQIPQFVLDAVDLETPDKRRKMMIACTQPR
RVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMADPLLERY
KVIILDEAHERTLATDVLFGLLKEVLKNRSDLKLVVMSATLEAEKFQGYFFGAPLMKVPG
RLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKISKEVSN
MGDQVGPVKAVPLYSTLPPAMQQKIFEPPPPPLKEDGPPGRKIVVSTNIAETSLTIDGIV
YVIDPGFAKQTVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNNDL
QPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGN
LTKLGEIMSELPLDPQMSKMLVVSPEFNCSNEILSISAMLSVPNCFIRPREAQKAADEAK
ARFGHIDGDHLTLLNVYHAYKQNNEDPSWCYDNFINHRALKAADNVRQQLVRIMARFNLK
LCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWV
IYNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLSNFPQCEAKHVIERLYKKREKEKVEA
RSRK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgggtacggaacgaaagaggaaggtgagcttgttcgatgtggtagacgattctgtggct
aagatgacgaaatccaacggtggcgtcaataacagcgtcgctaacagtctcatcaatcgc
tggacagcgaagccttactcccaaaggtactttgagattttggagaagagaaagacgctc
cctgtttggcaccagaaagacgagtttttccagactttgaaggataaccagactttgatt
ctcgtcggcgagactggtagtggcaaaaccacccagatccctcagtttgtgttggatgct
gtcgatttagaaaccccggataaacgtaggaagatgatgattgcatgtactcagccgcgg
agagtggctgcaatgtctgtttctcgtcgtgtggctgaagagatggatgtaactattggg
gaagaggttggttacagtatcagatttgaagactgcagtagtgcaaggacagttttgaag
tatcttacagatggtatgctcttaagagaagcaatggcagatccacttttggaacgatat
aaagttattattcttgatgaggcacatgagaggactttagctacagatgtgctatttggc
cttctgaaggaggtccttaaaaatagatctgacttaaagttggttgttatgagtgcaact
cttgaagctgaaaagttccagggctatttttttggtgcccctcttatgaaagttccagga
aggctacatcctgtggaaattttctatacacaggaacctgaaagggattacttggaggct
gccattaggacagtggtacagatacacatgtgtgaacctccgggagatatacttgtattt
ctgactggagaggaagagatagaagatgcatgtcgcaaaatatcaaaagaagtttctaat
atgggagaccaggtggggcctgtcaaagcggtacccctatattctactcttcctccagcc
atgcagcagaagatttttgagccacctccacctccactgaaggaggatgggcctcctgga
aggaagattgtggtatcaactaacatagcagaaacttccttgacaattgatggtattgtc
tatgtcattgacccagggtttgccaagcagacagtttataatccccgcgttcgtgtggaa
tctctgttagtgtcaccaatatctaaagccagtgcacatcagagatcagggcgtgctgga
agaactcaaccagggaaatgttttagactttacactgagaaaagtttcaataatgatctt
cagccacagacctatcctgaaattttgagatcaaatcttgccaacacagttcttactttg
aagaaactgggtatagatgatttagtgcattttgatttcatggaccctcctgcccctgag
accttaatgcgtgcattggaagtgttgaattacttgggagcactggatgatgatggtaac
ttaaccaaactgggtgaaattatgagtgagttacccttggacccacagatgtcaaagatg
cttgttgtcagtcctgaattcaactgttcaaatgagattctgtcaatttctgccatgctt
tcagtacccaattgctttatacggcctagggaggcacaaaaagctgcggatgaggcaaaa
gctaggttcgggcacattgatggagatcatctcacgctcttgaatgtttaccatgcatac
aagcaaaataatgaggatccatcttggtgttatgataacttcattaatcatagggctttg
aaagcagctgataatgttagacaacaattagtgcgtatcatggcccggtttaatctgaag
ttgtgcagcactgacttcaacagccgtgactattatgtcaacattagaaaagctatgcta
gctgggtatttcatgcaggttgctcatctggaacgtacaggacactacttgacagtgaag
gataaccaggtggtgcatttgcatccatcaaattgtctagaccacaagcctgaatgggtc
atttataatgaatatgttcttaccagtcggaattttattcgtactgttacagacatacgc
ggggaatggttggttgatatagcaccgcattactatgatttgtctaattttccacaatgt
gaggcaaagcatgttattgagagactttacaagaagcgagagaaggaaaaggtggaagcg
aggagccgcaaatga
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integrated database retrieval system
