Abrus precatorius (Indian licorice): 113863864
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Entry
113863864 CDS
T07330
Name
(RefSeq) general negative regulator of transcription subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113863864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113863864
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113863864
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113863864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5965
Motif
Other DBs
NCBI-GeneID:
113863864
NCBI-ProteinID:
XP_027353418
UniProt:
A0A8B8LDN9
LinkDB
All DBs
Position
Unknown
AA seq
898 aa
AA seq
DB search
MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELESQIDNFEAELEGLSVKKGKSRPPRLTHLETSITRHKA
HIKKCEFILRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVDT
LEDLVTIPAALSKVAPGLSLKSSPAPSASASASASQSSETMISNYQDTYVQEQADDTASL
DSNSDIAAKTPPSKSVGISSAPSTPAGNHATPVSVNVSGPNVPSVPAVAVLPGSNSLRNV
ENTNVTNSSSVNPSTSTKDEEINSFPSRRPSPSLSDATLVRGRNGLSNQATASIPLGSGN
MVSTNGGLGSVPLVSEITKRNMLGADDRLGSSGMVQPLVSPLSNRLILPQAVKANDGTVS
VDSSTVNEAAAVSGRVFSPSVVPGMQWRPGSPFQNQNDAGQLRGRTEIAPDQREKFLQKY
QQVQQGHSTLLNMPSLVGGNHKQFSSQQQNPLLQQFNSQGSSVSSQSGIGLGVQSTNLSG
ISSASLQQPNSVHSSSSQQPLMPGVPKDADVGNSKIEEQQQHQNFPDESTTESTASTGTV
KNLINEDDSKSTYAVDFPAGVSASLPESAQTSRDIDLSPGQPLQSNQATGNLGVIGRRNG
PELGAIGDNFSGSSVSSGGVRDQFFNLQMLEAAHFKIPQSKDSERPRTYTPRHPAITPPS
YPQVQAPIVNNPAFWERLGLEPFGTDTMFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYN
TWFQRHEEPKVATDEYEQGTYVYFDFHIANDDMQHGWCQRIKTEFTFEYNYLEDEVLS
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgagtcgaaagcttcagggagagatagatcgtgttctgaagaaagtgcaggaa
ggtgttgaagtattcgatagcatctggaacaaggtatacgacacggacaatgctaaccag
aaggagaaattcgaagcagacctcaagaaggagattaagaagctccaaagatatagagat
caaattaagacttggattcagtccagtgagatcaaggacaagaaggttagtgcctcatat
gagcaggctctggtggatgcacgcaagctaattgagcgagaaatggaaagatttaagata
tgtgaaaaggaaacaaagaccaaagcattctccaaagaaggcttaggtcaacagccaaag
actgatccaaaagagaaggctaaatccgagacaagggattggttaaataatgtggttgga
gagttagaatcccagatagataactttgaagcagagcttgaagggctttctgttaagaaa
ggaaaaagcaggccgcccagattgacgcatctggagacatcaattactcggcacaaggca
catataaaaaaatgtgaattcattttgaggctactagataatgatgaattgagtcctgag
caggttaatgatgttaaagatttcttggatgactatgtcgagcgtaatcaggaggatttt
gatgaattcagtgatgttgatgaactatacagttcattacctttagacaaggtggatact
ctagaagatcttgtcacaattcccgctgctctttctaaggtggcacctggtcttagcttg
aagagttctccggcaccatcagcatccgcatcagcatctgcatcacaatcatctgaaact
atgatttctaattatcaggatacttatgttcaagagcaagctgacgacacagcatccctg
gatagtaattctgacattgctgcaaagactccaccttctaaaagtgttggaattagttct
gctccttcaacacctgctggcaaccatgctactcctgtttccgtgaatgtttctggtcct
aatgtgcccagcgtacctgctgttgcagttctacctgggtcaaattctctgcggaatgtc
gaaaatactaatgttaccaattcatcttctgtaaatccgtctacctctacaaaggatgaa
gagattaatagcttccctagccggagaccatctccatcactttctgatgcaacacttgtg
aggggcagaaacggcctgtcaaatcaagcaacagctagcattcctcttggttctggaaac
atggtttccaccaatgggggccttggttcagtccctttagtctccgaaataaccaaaagg
aacatgttgggagctgatgatagacttggaagtagtgggatggtgcagcctcttgtatcc
ccgctaagtaatagattgatcttgcctcaagctgtgaaggctaatgatggaactgtttca
gttgactctagtactgttaatgaagctgcagctgtatctgggagagttttctccccttct
gtggttcctggcatgcaatggagacctggaagtccctttcagaatcagaatgatgcaggc
cagcttcgtggaagaactgaaatagctcctgatcaaagggaaaaatttctgcagaagtat
cagcaagtgcaacaagggcacagcacccttcttaatatgccttctcttgttgggggaaat
cataagcagttttcttcccagcagcaaaatccccttttacagcagtttaactctcaaggc
tcatctgtttcttctcaatctggtattggacttggtgtccagtccacaaatctcagtggt
atttcttctgcctcgctacagcagcccaattctgtccattcctcatctagtcagcagcca
ttgatgccaggtgttcctaaggatgcagatgttggcaattctaagattgaagagcagcag
caacatcagaattttcctgatgagtcaacaaccgaatctactgctagcactgggactgta
aagaatctcataaatgaagatgattcaaaatcaacatatgctgtagattttcccgcagga
gtatctgcctctcttccagaatctgctcaaacttccagggatattgatttgtctcctggt
caacccttgcaatccaatcaagctactggtaaccttggtgtcattggaagaagaaatggt
cctgaacttggggcgattggtgataattttagtggatcaagtgtttcttctggtggagtg
cgtgatcaattttttaatttgcaaatgcttgaggcagcccacttcaaaattccacaatct
aaagactctgaacgtcccaggacttatacccctaggcatccagcaattacacctcctagc
tatccccaagtacaggcaccaattgttaataatcctgccttttgggagagattaggtctt
gaaccatttggcaccgatactatgttctttgcattttattatcaacagaatacataccaa
cagtatttggctgcaaaggagctaaaaaagcagtcttggagataccaccgaaagtataac
acatggtttcagcggcacgaagagcccaaagttgctacagatgaatatgagcagggaaca
tatgtgtactttgattttcatattgcaaacgatgacatgcaacatggatggtgtcaaaga
atcaagactgaattcacttttgagtataattatcttgaagatgaagttctttcatag
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