Abrus precatorius (Indian licorice): 113864276
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Entry
113864276 CDS
T07330
Name
(RefSeq) uncharacterized protein LOC113864276 isoform X1
KO
K06100
symplekin
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113864276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aprc03021
]
113864276
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113864276
Transcription machinery [BR:
aprc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113864276
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
113864276
U7-dependent histone pre-mRNA processing factors
113864276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
CRM1_C
Motif
Other DBs
NCBI-GeneID:
113864276
NCBI-ProteinID:
XP_027353625
UniProt:
A0A8B8LBK9
LinkDB
All DBs
Position
Unknown
AA seq
1328 aa
AA seq
DB search
MAAPTRDRDQALSLLAAANNHGDLSVKTSSLKQAKDLLLSTDPSLAAELFPYLLELQSSP
ESLVRKLLIQIIEEIGFRAVEHSPKLISVLLTFLRDSDVMVIKQSIVSGTNIFRSVLEEM
IVQFQQYGKVERWLEDIWMWMLKFKDAVFGIALEPGSVGIKLLALKFLETVVLIFTSDIS
DTDKSATEGVRQAVNVSWLVGGHPHPVLDPVLLMSEANRTIGILLNLLQSAGSLPGCLTI
TVVNCLAAIARKRPQHYDNILSALLDFDPNFQTVKGCHVASIQYSLRTAFLGFLRCTYSP
ILESRERLIRSLRAMNAGDAADQVIRQVDKMIKNGDRSTRDTRVSKDDQPSSQSPVSGEL
SRKRHAPPDNEQLANGHEAISKRIRTGPDSHSTLPAQINDSGQDLNPVNGVSSNAPLLDS
ELTAVEQMIAVIGALLAEGERGAESLEILISKIHPDLLADIVITNMKHLPKTPPPLARLG
NLPVTQVSSQVSQSQVIAASVPINSVTAQASFPSTTATAIATTSSPSDTSNFSNLPADSK
RDPRRDPRRLDPRRVVVTPGGATVSIADDTGVTKLEFDEHVSSIKPVSHPVVTANDNTPS
DLTVKIKNDDMISEGPSVSEPDRASPKTEILERPGDVHRITEANSLDLSLSSTELKDEDL
STVKLSDDTETVGTDSSSIVEFDQFSHDVQVASTSEDTCLELPELPPYVELSTEQENKVK
NVAIRHIIDSYKHLHGTDCQQFCMPLLARLVAQIDNDNEFNMMLEKHILEDHWRKGHELV
LHVLYHLHSRMILDSVGNTSSSAVLYEKFLLGVAKTLLDSFPASDKSFSRLLGEVPLLPE
STLKILSDLCYSDIVGHDGKIIRDIERVTQGLGAIWSLILGRPQNRQACLGIALKCAIHP
QDEIRAKAIRLVTNKLFQLSYISEDVEKFATEMLLSAVDHEVSDTGFMQSGPTEERAKAE
VLESTISENDSARVAKPMIQSVPSISFSEAQRLISLFFALCTKKPSLLQIVFNVYGQAPR
TVKQAFHRHIPIVVRALGQSYSELLRIISDPPQGSENLLTLVVQILTQDTTPSSDLISTV
KCLYETKFKDVTILVPLLSSLSKKEVLPIFPRLVDLPLEKFQRALAHILQGSAHTGPALT
PVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQSPLPLLFM
RTVIQAIDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQTQPRSFQVLLQLPPQ
QLESALNRHANLRGPLASYASQPTVKSSLSRSTLAVLGLANDAHVQQHLSTSLHPSDTSS
SVHGATLT
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcctacgagggacagggaccaagccctctctctcctcgccgctgccaacaac
cacggcgacctctccgtcaaaacctcttccttgaaacaagccaaagaccttcttctatcc
accgacccctctctagccgccgaactcttcccttacttgctcgagcttcagtcttccccc
gaaagcctcgttcgcaaattgctcatccagataattgaggagattggttttagagctgtt
gagcactctcctaagctgatatctgtactattaacatttttacgagacagcgatgtaatg
gttataaaacagtctattgttagcggtacaaatatcttccgtagtgttttagaggagatg
attgtgcagtttcaacaatatggtaaagttgagaggtggctagaagatatttggatgtgg
atgcttaagttcaaggatgctgtttttgggattgctctggagcctggttctgttggaata
aagttgctggcactgaaattcttggaaacggttgtattaatttttacatctgacatcagt
gatactgataaatcagctacagaaggcgttaggcaagctgttaatgtctcatggttagtg
ggtggtcacccccatcctgttcttgatccggtgttgcttatgtcagaggcaaataggact
attggcattctattaaatttattgcagtctgctggcagtcttcctggttgcttgacaatt
accgttgtaaattgtttagcagccattgcaaggaaaaggccacagcactatgataatatt
ctttcagcattgcttgattttgatccaaattttcaaactgtgaaaggatgccatgttgct
agcattcagtactccttaagaacagcttttttgggttttctaaggtgcacttattcacca
atattagagtcaagagaaagactaataaggagcctgcgggctatgaatgcgggtgatgct
gctgatcaggtcattcgacaagttgacaaaatgattaaaaatggtgatcgttctacccgt
gatacacgagttagcaaggatgatcaaccatcaagtcagtcacctgtttcaggggaatta
tctagaaaaagacacgctcctccagataatgaacaattggccaatggtcatgaagccatc
tcaaagcgaatacgtactggtcctgactctcactctactttaccagctcaaatcaatgat
tccgggcaggatcttaaccctgttaatggagtatcatctaatgctcctctgctggatagt
gaactaactgctgtagagcaaatgattgctgtgattggtgctttacttgctgaaggagag
agaggtgccgaatctcttgaaatcctcatttcaaagattcatcctgatctgttggctgat
attgtcataactaatatgaagcacttgcctaagacccccccaccactagcaaggcttggg
aatttaccagtaacacaagtgagctcccaagtcagtcaatcacaggttatagcagcttct
gttccaataaactctgtcactgcccaagcatcattcccttcaactacagccactgctatt
gccactacttcatcgccatctgacacatctaacttcagtaacctgcctgcagattctaaa
cgtgatccacgccgggatccccggcgcctggatccacggcgtgttgtggtaactcctgga
ggagcaactgtatcaattgcagatgatactggggtcacaaaattagagtttgatgagcat
gtgtcttctattaagcctgtttcacatcctgttgtgactgctaatgacaatactccatca
gatctaacagtcaaaataaaaaatgatgatatgatctctgaaggaccctcggtttctgaa
cctgatcgggcatcacccaaaacagagatcttggaaagacctggagatgttcatcggatt
acagaagctaattctttggatctctcactctcttccactgaattaaaagatgaggatttg
agtacagtgaagctgtcggatgatactgaaacagttgggacagattcatcatctattgta
gagtttgatcaattttctcatgatgttcaagttgcatctacatcagaagatacctgtctg
gagttaccagagcttccaccttatgttgaactatctacagaacaggaaaataaagtgaaa
aatgtggctattcggcatataattgattcttacaaacatttgcatgggacagattgtcag
cagttttgcatgccactacttgcccgactagttgctcagattgataatgacaacgagttt
aatatgatgctggaaaaacacatcctagaagatcactggcgaaaggggcatgaacttgta
ctacatgttttgtaccatcttcactctcgcatgatattggattcagttggaaacacttca
tcttctgctgttttgtatgaaaaatttctcttgggagtggccaaaactttgttggattct
tttccagcttcagacaagtcttttagtagacttcttggtgaagtcccacttttgcccgaa
tcgaccttgaagattttgagtgatctttgctattctgatattgttggtcatgatgggaaa
attatccgtgacattgaacgagtaactcaaggtcttggtgccatctggagtttaattttg
gggcgtccacaaaatcgccaagcctgcttaggaatagcattgaagtgtgctattcaccca
caggatgagattcgtgcaaaagctattcggctggttacaaacaagctctttcagcttagt
tacatatcagaagatgttgagaaatttgcaacagaaatgcttctttctgctgtagatcat
gaagtttcagatacaggttttatgcagtctggacctactgaagaaagagccaaggcagag
gttttagagtccacaatttctgaaaatgactctgctagagttgctaaaccaatgattcaa
agtgttccatctatatctttttctgaagctcaacgcctcatttctttgttttttgcttta
tgtacaaagaaacccagtcttcttcagattgtatttaatgtatatgggcaagccccgaga
actgtaaaacaggcttttcatcgccacattcctattgttgtgagggcattagggcaatct
tattctgaattgctccgtatcatatctgatccaccacaaggaagtgaaaatcttctgaca
ctggtggtgcaaatattgactcaagacacaacgccatcttctgatttgatatctacagtt
aaatgtttatatgaaactaaatttaaagatgttacaatacttgttccgttactgtcatca
ctttccaaaaaagaggttttaccaatattccctcggcttgttgatcttccattggaaaag
tttcaaagggcactagctcacatactacagggttcagctcatacaggtccagctttaaca
cctgtggaagtgttggttgcaatccatggaattgttcctgagaaagatggcctggcactt
aagaagataacagatgcctgctcggcttgttttgagcaacgtacagtgttcacacaacag
gttctggcaaaggcactgaaccagatggttgatcaaagcccgctgcctctacttttcatg
agaacagttattcaggcaattgatgcttttcctgcgctggttgattttgttatggagata
ctctcaaaacttgtgactaaacaggtgtggcgtatgcccaaactttgggttggtttctta
aaatgtgtatatcagacacagccacgatcttttcaagtattattgcagttgccacctcaa
caactggaaagtgcactcaataggcatgccaatctcagaggtccccttgcttcttatgcc
agccaaccaactgtaaaatcttcacttagtaggtcaactttagcagtccttggtcttgca
aatgatgctcatgtgcagcaacatttgtctacttcgttacacccttctgacacaagttct
tcagttcacggagcaactctgacgtga
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