Abrus precatorius (Indian licorice): 113864910
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Entry
113864910 CDS
T07330
Name
(RefSeq) protein PAT1 homolog isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113864910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113864910
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113864910
mRNA degradation factors
5'-3' decay
Decapping complex
113864910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_NSD
RGM_C
Motif
Other DBs
NCBI-GeneID:
113864910
NCBI-ProteinID:
XP_027354942
UniProt:
A0A8B8LFM9
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MDGFGSAATPTPGDHKQFGNVSKEDEVFDASQYAFFGKDAAEEVELGGLEDYDDHMPMPA
VEFNEEDFFLNKEEAEDVRSLSDIDDLTTTFLKLNKVVSGPRSAGVIGDRGSRENSSASE
WSQRDDVPYWSDQHAYDSEGQGTRDGKRWSSHPHSSLTQLQDSRPLYRTSSYPEQQRQLQ
HHLQHCSSEPVPNWFDQHFYDSETTEDGKRWSSQPHFPIAHIQESKPLYRTSSYPDKRQE
LTRFSSEPILVPKSSFTSYPPPGGQSQQSSPNHSTGHLNILYHAGGAHMALPSQNRSPFF
NSALQLSGSKHDSHFSGHMRQFTTGSSLNHQIQNPWVHQTGLYSGDHPNLLTNMLQQQLP
HHSRSVSPHLLTQLQQQQHRLHHPVQQSAGYMSGYQSHLFSPQISSASSIVSKSEHMLGL
VDVREHRSKSTHKGKHSHRFCQQGSDASSQKSESGSLQFRSKYMTSDEIESILKMQLAVT
HCNDPYVDDYYHQACLAKNPGAKLKHSFCPTQIKELPPRARSNSESHGCLQVDALGRVSF
LAIRQSRALLEVDPPNSSVSGSSERNISEKPLEQEPLFAARVSIEDGLCLLLDVDDIDRF
LQCNQLQDGGTQLRRRRKVLLEGLATSLQLVDPLGKNGHKVGLGAKDDVVFLRLVSLPKG
RKLLAKYLQLLVPGSELMRIVCMTIFRHLRFLFGSLPSDPAAGETTSDLAKVVSQCVQGM
DLGALGACLAAVVCSAEQPPLRPLGSTTGDGASRVLVSVLDRATELLTDSHGACSYNNGN
RSFWQASFDEFFGLLTKYCMNKYHSIMQSLLVQGTPNVAAIGSDAAKAISRDMPVELLRA
SLPHTDDHQRKLLLDFAQRSVPVVGFNSYTGSSGGHVNSETVLS
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggatgggtttggttctgctgctactcccacccccggcgatcataaacaattcggaaat
gtttccaaagaagatgaagtatttgatgcatcacaatatgcattctttggtaaagatgct
gctgaggaagtagagttggggggattagaagattatgatgaccatatgcctatgcctgct
gttgagttcaatgaggaagatttctttctcaataaagaagaggcggaggatgtaagatct
ctttccgatattgatgatctcactacaacttttttaaagttgaacaaggttgttagtgga
cctagaagtgcaggagttattggtgatcgaggatcaagagaaaattcctctgcctctgaa
tggtcacaaagggatgatgttccttactggtctgatcagcatgcttatgacagtgaaggg
caaggcactcgggatggcaaaagatggtcatctcatccccattcttctctaactcagctt
caagactcaaggcccttgtacagaacatcttcatatcctgagcagcaacggcagctgcaa
caccacctccaacattgctctagtgaacctgttcctaactggtttgatcagcatttttat
gatagtgaaactactgaggatggaaagagatggtcatcacaaccacatttccccattgca
cacatacaagaatcaaagcccctgtatagaacatcttcatatcctgacaagagacaggaa
cttactcgtttttctagtgaaccgattttagtaccaaaatcttcatttacttcttatcct
ccccctggtggtcagtcccaacagtcttctccaaatcacagtacaggtcacttgaacatt
ctttatcatgctggtggggctcatatggctttgccatcacaaaatcgctctcctttcttc
aattctgctctacagttgagtggatcaaaacatgattcacattttagtggacacatgcgc
caatttacaactggctcctctcttaatcatcaaatacagaatccctgggttcaccaaaca
ggattgtattctggagatcatccaaatctcctgactaatatgttgcagcaacaattacct
catcacagcagatcagtatcacctcacttattgacccaattgcagcaacaacagcacaga
ttgcatcatcctgttcagcaatcagcaggctacatgtcaggttaccagtcccatttattt
agcccccagatttcatctgcatcgtccatagttagcaaatctgaacacatgcttggtctt
gttgatgttagagaacatagatcaaaatcaacacataagggtaaacatagtcatcgtttc
tgccaacagggttctgatgccagcagccagaaaagtgaaagtggttcattacagtttagg
tccaagtacatgactagtgatgaaatagagagtattcttaaaatgcagcttgctgtgact
cattgcaatgacccctatgttgatgactattaccaccaagcttgtcttgctaaaaatcct
ggggctaagttgaaacattcattttgcccaacccaaataaaggagcttcctcctcgggcc
cgttccaattctgagtcacatggttgtcttcaggtcgatgctttagggagggtttcattc
ctggctattcggcagtctcgtgctcttcttgaagttgatcctccaaactcttctgttagt
ggtagctctgagagaaatatttcagagaagccccttgaacaggagcctttgtttgcagcc
agggtctcaattgaggatggtctatgtcttcttcttgatgtagatgatatcgatcgcttt
ctacagtgtaatcagcttcaagatggtggaactcaattaagacgaagacggaaggtcctt
ttggaaggactagcaacatcactccaacttgttgacccactgggaaagaatggacacaaa
gttggacttggtgctaaagatgatgttgttttcttacgactggtatctctacccaaaggg
cgtaaactcctagcaaagtatcttcagttacttgttcctggtagtgagcttatgcggata
gtctgcatgaccatatttcgacatttgagattcttatttggcagcctcccttctgatcct
gctgctggggagactacaagtgaccttgctaaggttgtttctcaatgtgtccaaggaatg
gatcttggtgctttgggtgcttgccttgcagcagtggtttgctctgcagagcagcctcct
ctacgcccccttggaagcactactggtgatggtgcttcacgtgttttagtatctgttctt
gacagggctactgaacttttaactgattcccatggtgcttgcagctataacaatggtaat
cgttcattttggcaagcctcatttgatgaattttttggtcttctcactaagtattgcatg
aataagtaccatagtatcatgcaatcactgcttgttcaagggacaccaaatgtagctgca
attggatcagatgctgctaaagcaattagtagggacatgcctgtggaactcttacgagca
agtcttcctcacaccgatgaccaccagaggaagttattactggattttgctcagcgctct
gtgcctgtggttggatttaacagttatactgggagcagcggtggtcatgtgaactcagag
acagtgctaagttga
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