KEGG   Abrus precatorius (Indian licorice): 113864910
Entry
113864910         CDS       T07330                                 
Name
(RefSeq) protein PAT1 homolog isoform X1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
aprc  Abrus precatorius (Indian licorice)
Pathway
aprc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aprc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113864910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aprc03019]
    113864910
Messenger RNA biogenesis [BR:aprc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113864910
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     113864910
SSDB
Motif
Pfam: PHD_NSD RGM_C
Other DBs
NCBI-GeneID: 113864910
NCBI-ProteinID: XP_027354942
UniProt: A0A8B8LFM9
LinkDB
Position
Unknown
AA seq 884 aa
MDGFGSAATPTPGDHKQFGNVSKEDEVFDASQYAFFGKDAAEEVELGGLEDYDDHMPMPA
VEFNEEDFFLNKEEAEDVRSLSDIDDLTTTFLKLNKVVSGPRSAGVIGDRGSRENSSASE
WSQRDDVPYWSDQHAYDSEGQGTRDGKRWSSHPHSSLTQLQDSRPLYRTSSYPEQQRQLQ
HHLQHCSSEPVPNWFDQHFYDSETTEDGKRWSSQPHFPIAHIQESKPLYRTSSYPDKRQE
LTRFSSEPILVPKSSFTSYPPPGGQSQQSSPNHSTGHLNILYHAGGAHMALPSQNRSPFF
NSALQLSGSKHDSHFSGHMRQFTTGSSLNHQIQNPWVHQTGLYSGDHPNLLTNMLQQQLP
HHSRSVSPHLLTQLQQQQHRLHHPVQQSAGYMSGYQSHLFSPQISSASSIVSKSEHMLGL
VDVREHRSKSTHKGKHSHRFCQQGSDASSQKSESGSLQFRSKYMTSDEIESILKMQLAVT
HCNDPYVDDYYHQACLAKNPGAKLKHSFCPTQIKELPPRARSNSESHGCLQVDALGRVSF
LAIRQSRALLEVDPPNSSVSGSSERNISEKPLEQEPLFAARVSIEDGLCLLLDVDDIDRF
LQCNQLQDGGTQLRRRRKVLLEGLATSLQLVDPLGKNGHKVGLGAKDDVVFLRLVSLPKG
RKLLAKYLQLLVPGSELMRIVCMTIFRHLRFLFGSLPSDPAAGETTSDLAKVVSQCVQGM
DLGALGACLAAVVCSAEQPPLRPLGSTTGDGASRVLVSVLDRATELLTDSHGACSYNNGN
RSFWQASFDEFFGLLTKYCMNKYHSIMQSLLVQGTPNVAAIGSDAAKAISRDMPVELLRA
SLPHTDDHQRKLLLDFAQRSVPVVGFNSYTGSSGGHVNSETVLS
NT seq 2655 nt   +upstreamnt  +downstreamnt
atggatgggtttggttctgctgctactcccacccccggcgatcataaacaattcggaaat
gtttccaaagaagatgaagtatttgatgcatcacaatatgcattctttggtaaagatgct
gctgaggaagtagagttggggggattagaagattatgatgaccatatgcctatgcctgct
gttgagttcaatgaggaagatttctttctcaataaagaagaggcggaggatgtaagatct
ctttccgatattgatgatctcactacaacttttttaaagttgaacaaggttgttagtgga
cctagaagtgcaggagttattggtgatcgaggatcaagagaaaattcctctgcctctgaa
tggtcacaaagggatgatgttccttactggtctgatcagcatgcttatgacagtgaaggg
caaggcactcgggatggcaaaagatggtcatctcatccccattcttctctaactcagctt
caagactcaaggcccttgtacagaacatcttcatatcctgagcagcaacggcagctgcaa
caccacctccaacattgctctagtgaacctgttcctaactggtttgatcagcatttttat
gatagtgaaactactgaggatggaaagagatggtcatcacaaccacatttccccattgca
cacatacaagaatcaaagcccctgtatagaacatcttcatatcctgacaagagacaggaa
cttactcgtttttctagtgaaccgattttagtaccaaaatcttcatttacttcttatcct
ccccctggtggtcagtcccaacagtcttctccaaatcacagtacaggtcacttgaacatt
ctttatcatgctggtggggctcatatggctttgccatcacaaaatcgctctcctttcttc
aattctgctctacagttgagtggatcaaaacatgattcacattttagtggacacatgcgc
caatttacaactggctcctctcttaatcatcaaatacagaatccctgggttcaccaaaca
ggattgtattctggagatcatccaaatctcctgactaatatgttgcagcaacaattacct
catcacagcagatcagtatcacctcacttattgacccaattgcagcaacaacagcacaga
ttgcatcatcctgttcagcaatcagcaggctacatgtcaggttaccagtcccatttattt
agcccccagatttcatctgcatcgtccatagttagcaaatctgaacacatgcttggtctt
gttgatgttagagaacatagatcaaaatcaacacataagggtaaacatagtcatcgtttc
tgccaacagggttctgatgccagcagccagaaaagtgaaagtggttcattacagtttagg
tccaagtacatgactagtgatgaaatagagagtattcttaaaatgcagcttgctgtgact
cattgcaatgacccctatgttgatgactattaccaccaagcttgtcttgctaaaaatcct
ggggctaagttgaaacattcattttgcccaacccaaataaaggagcttcctcctcgggcc
cgttccaattctgagtcacatggttgtcttcaggtcgatgctttagggagggtttcattc
ctggctattcggcagtctcgtgctcttcttgaagttgatcctccaaactcttctgttagt
ggtagctctgagagaaatatttcagagaagccccttgaacaggagcctttgtttgcagcc
agggtctcaattgaggatggtctatgtcttcttcttgatgtagatgatatcgatcgcttt
ctacagtgtaatcagcttcaagatggtggaactcaattaagacgaagacggaaggtcctt
ttggaaggactagcaacatcactccaacttgttgacccactgggaaagaatggacacaaa
gttggacttggtgctaaagatgatgttgttttcttacgactggtatctctacccaaaggg
cgtaaactcctagcaaagtatcttcagttacttgttcctggtagtgagcttatgcggata
gtctgcatgaccatatttcgacatttgagattcttatttggcagcctcccttctgatcct
gctgctggggagactacaagtgaccttgctaaggttgtttctcaatgtgtccaaggaatg
gatcttggtgctttgggtgcttgccttgcagcagtggtttgctctgcagagcagcctcct
ctacgcccccttggaagcactactggtgatggtgcttcacgtgttttagtatctgttctt
gacagggctactgaacttttaactgattcccatggtgcttgcagctataacaatggtaat
cgttcattttggcaagcctcatttgatgaattttttggtcttctcactaagtattgcatg
aataagtaccatagtatcatgcaatcactgcttgttcaagggacaccaaatgtagctgca
attggatcagatgctgctaaagcaattagtagggacatgcctgtggaactcttacgagca
agtcttcctcacaccgatgaccaccagaggaagttattactggattttgctcagcgctct
gtgcctgtggttggatttaacagttatactgggagcagcggtggtcatgtgaactcagag
acagtgctaagttga

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