Abrus precatorius (Indian licorice): 113864950
Help
Entry
113864950 CDS
T07330
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113864950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113864950
03012 Translation factors [BR:
aprc03012
]
113864950
Enzymes [BR:
aprc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113864950
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113864950
Translation factors [BR:
aprc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113864950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
T2SSE
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
113864950
NCBI-ProteinID:
XP_027355017
UniProt:
A0A8B8LFW4
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MHNPKSAASFLIARAKSLRLHHHYHRVPSSTSTPLFKPQPCLSSLRNAKSLIATRLFSGY
YSLEQFSDDEYDCDFGSQQASSTVANVDEWKWKLSMLLRSEKDQEIVSRDRKDRRDYEQI
ANLAKRMGLFSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEYLD
RLQLNSEKTIDHLDDAKSAKQVKDIDMDENADSFVDESVMEKVLQKRSLRMRNMQRAWQE
SPEGKKMLEFRKSLPSFKEKQGLLQAIAHNQVIVISGETGCGKTTQLPQYVLESEIESGR
GAFCSIICTQPRRISAMAVAERVSAERGEPLGETVGFKVRLEGMKGKNTHLLFCTSGILL
RRLLSDRNLNGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELFSN
YFGGAPTFHIPGFTYPVRAHFLEDVLEMTGYKLTSFNQIDDYGQEKMWKTQKQLAPRKRK
NQITALVEDALSKSSFENYSSRARDSLASWAPDCIGFNLIEAVLCHICRKERPGAVLVFM
TGWEDISCLRDQLKAHPLLGDPNRVLLLTCHGSMATSEQKLIFEKAPPNIRKVILATNMA
EASITINDIVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGECYHL
YPKCVYEAFSEYQLPELLRTPLNSLCLQIKSLQVESIGEFLSAALQAPEPRAVQNAIDFL
KMIGALDEKEDLTNLGMFLSMLPVDPKLGKMLIMGAIFRCFDPVLTIVAGLSVRDPFLLP
QDKRDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHS
LRKQFSFILKEGGLVDADASFINKLSHNQSLVRAVICSGLFPGIASVVHRETSMSFKTMD
DGQVLLYANSVNARYQTIPYPWLVFGEKVKVNAVFIRDSTGVSDSILIFFGGALSNGMQA
GHLKMLDGYVDFFMDPSLADCYLKLKEELDKLIQKKLEDPSFDIHKEGKYLMLAVQELVS
GDQCEGRFVFGRESRKPRASNDENKFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKTNE
FRALVEFKGMQFVGKPKRNKQLAERDAAIEALAWLTHTSDNYQHEDDNSPPDVTDNMLKL
LGKRRKSKRRSG
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgcataatccaaagtctgcagcgtcttttctgatagcacgtgccaagtccctcagactt
caccaccactatcaccgtgtcccttcttcaacctcaaccccactcttcaaacctcaacct
tgcctttcttctttacgtaatgccaaatccctcatcgccacacgcctcttctccggttac
tattccctcgaacagttctccgacgatgaatacgactgtgatttcggtagccaacaggca
tcgtcgacggtggccaatgtggatgagtggaaatggaaactcagcatgctgttacgcagt
gaaaaggaccaggagattgtatctagagacaggaaagataggagagactatgaacagata
gctaaccttgccaaaagaatgggacttttcagtgagttgtttggaaaagtcgttgttgca
agcaaggtgcctcttcctaactaccggccagatttggatgacaaacgcccacaaagagag
gttgttattcctctaagcttgcaaaggagggttgagggtttgttgcaagaataccttgat
agacttcagttgaattctgaaaagacaattgaccacctggatgatgcgaagtctgccaaa
caggttaaagatatagacatggatgaaaatgctgattcttttgtggatgaatctgttatg
gaaaaggttcttcagaagaggagtttgaggatgcgtaatatgcaaagggcttggcaggaa
tcacctgaaggcaagaagatgctggaattccggaagtcactaccatcattcaaggagaag
caaggtttacttcaagctatagcacataaccaggtgatagttatatccggagagactgga
tgcggtaaaaccactcaacttcctcagtatgtattagaatcagagatagagtctggtcgt
ggagcattttgtagcattatttgcacacaacctcgaaggatatctgctatggcagtggct
gagagagtgtcagctgagagaggagagcctcttggtgaaacagttggcttcaaagttcga
ttagaaggaatgaaggggaaaaacacccatctactattttgtaccagtggtatattactt
agaagattgctaagtgatcgaaacctgaatggtataacacatgtttttgtggatgaaatt
catgaaagaggcatgaatgaagacttcttactgattgttttaaaggatctgctgccacgt
cgtcgggatttaagattagttttaatgagtgccaccttgaatgctgagcttttttcaaat
tattttggaggtgctcctacatttcatattccaggtttcacctatcctgttagagctcac
tttttagaagatgttttggaaatgactggatataagttgacttcctttaaccaaattgat
gattatggtcaagagaaaatgtggaaaacacaaaagcaactagcgccacgaaagaggaaa
aatcagatcactgctcttgtcgaggatgctctttctaaatcaagttttgagaactatagc
tccagggcacgtgattctcttgcatcttgggcacctgattgcatagggtttaatctaatt
gaggctgttctttgccatatatgtcggaaggaacgaccaggtgctgtcttagtatttatg
actggttgggaggatataagctgtttaagagatcaacttaaagcgcatcctcttttagga
gatcccaatagagttctgcttctaacatgtcatggttcaatggcaacatcagaacagaaa
ctcatatttgagaaagcacctccaaatataagaaaagtaatacttgctacaaatatggca
gaggcaagtattacaatcaatgacatagtgtttgtggttgattgtggaaaagcaaaagag
accacttatgatgctttgaataacacaccatgtcttctaccttcttggatatctcaagca
tctgcccggcagagaaggggtagagctggtcgcgtgcagccgggagaatgctaccacctt
tatcctaaatgtgtttatgaagctttttctgaatatcaactccctgaactactgagaacg
cccttgaactctctttgcttgcaaataaaaagtttgcaggttgagagcataggagagttc
ttatcagcagctttacaggcaccagagcctcgggctgttcaaaatgctattgattttctc
aagatgattggagcattagatgaaaaagaagatcttactaatcttgggatgtttctctct
atgcttcctgtagatcccaagctgggaaaaatgttaatcatgggagctatatttcgatgc
tttgatcctgttcttacaatagttgctggccttagtgtccgggatccttttcttttgccc
caagacaagagggatttagcgggcactgcaaagtctagattttctgctaaagattacagt
gaccatatggctcttgttcgagcatatgaaggatggaaagatgcagaaagagaaggatca
gcttatgagtactgctggagaaattttctctctgcccaaactcttcaggctattcattca
cttcggaagcagtttagcttcatcttgaaagaaggtggcttggtggatgcagatgcaagc
tttattaacaaattgagtcacaatcagtcacttgtgcgtgcagtcatttgttctggactc
tttcctggcatagcatcagtggtgcacagggagacatccatgtcatttaaaacaatggac
gatggccaggttttattatatgctaattcagtgaatgcacgctaccagaccattccttac
ccgtggttagtttttggtgagaaagttaaggtcaatgctgttttcatccgtgactccact
ggtgtatctgattcaatactcatcttttttggtggtgctctaagtaatggaatgcaggct
gggcatctgaaaatgttagatgggtatgttgacttcttcatggatcctagtttagctgac
tgctatttgaagcttaaggaagagcttgataagcttatccaaaagaagctggaagatcct
agctttgatattcacaaggaggggaagtacttgatgcttgctgttcaggagctggtttca
ggggatcaatgtgaaggaagatttgtatttggccgtgaaagccggaagcctagggcctct
aatgatgagaacaaattcacaaaagatgggacaaaccccaagagcttgctgcaaacactg
ttgatgcgagcagggcactctccaccaaaatacaaaacaaaacatcttaaaacaaacgag
tttagggccctggtggagtttaaaggaatgcaatttgttggcaaaccaaagagaaacaag
caacttgcagagagggatgctgctatagaggcattggcttggttgactcacacttctgat
aattatcagcatgaagatgataactctcctcctgatgtcactgacaacatgctaaaacta
ctagggaagcgtagaaaatcaaagcgacgctctggttga
DBGET
integrated database retrieval system
