Abrus precatorius (Indian licorice): 113865368
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Entry
113865368 CDS
T07330
Name
(RefSeq) WD repeat-containing protein ATCSA-1 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03420
Nucleotide excision repair
aprc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113865368
09124 Replication and repair
03420 Nucleotide excision repair
113865368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aprc04121
]
113865368
03400 DNA repair and recombination proteins [BR:
aprc03400
]
113865368
Ubiquitin system [BR:
aprc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113865368
DNA repair and recombination proteins [BR:
aprc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
113865368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_Nup120_160
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
113865368
NCBI-ProteinID:
XP_027355659
UniProt:
A0A8B8LLF0
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MWKQIRDREAGKLRAHCFANRVKSNRISQLQLSNHKDIVSPHKGSINCLQIDSTEGRYLL
SAASDASVAVYDVQRPTVSEAGGVISKHRSIFVVDKQHQTPHKYAVSSAIWYPIDTGLFI
TGSYDHHINVWDTNTTQVVVNFKMPGKVYRTAISNLSTSHMLVAAGTEDVQVRLCDIASG
AFTHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLNQSQTQLGRRP
PILKCSMITKDSSTKLRAAQKKHANGSGSRQLPIGRVPSKGPVKQRLHPGMLSTQDRATA
HYGAVTGLKATDDGMYLLSAGSDSRLRLWDIESGCDTLVNFETVRLQINKPIQLATTQDS
AFVFVPCMRAVKAFDMWSGNTDAILRGHYECVNSCWFNQQDQELYTGGNDRQILVWSPAR
SIVDEMDEGPADDQDSWSN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcagatcagagacagagaagctgggaaattacgtgcacattgtttcgcgaat
cgcgtgaagtccaatcgcatttcccaacttcaattatcaaatcacaaagacatcgtttcc
cctcacaaaggctccatcaactgtcttcagattgattcgacagagggaagatatttgtta
tctgccgcatccgatgcctccgttgccgtttacgacgttcaacgacccacagtttcggaa
gcaggtggtgtgatatcgaaacacaggtccatattcgtcgttgataagcagcaccaaacg
cctcacaagtatgccgtatcatcagctatatggtatccaattgacacgggattgttcatc
actggctcctatgatcatcatattaatgtttgggacactaacaccacgcaggtggtggtg
aatttcaaaatgcctgggaaagtttatcggactgccatatccaatttgtcaacgtctcac
atgcttgtcgctgctggcactgaggatgttcaagttcgcctttgtgatattgcttccggg
gcattcactcacactttgtccggtcaccgcgatggagtaatgactgttgaatggtctact
tcaagtgaatgggtcttagttactgggggatgtgatggtgcaatacgtttttgggacatc
aggcgcgccggatgtttcctagttttaaatcaatcccaaactcagcttggaagacgccca
cctatactcaaatgctccatgataactaaggattcaagtacaaaattacgtgctgcacaa
aagaagcatgccaatggaagtggtagcagacaactaccaattggcagagttccatccaag
ggaccagtgaagcagaggttacatccaggaatgctgtctacgcaggatcgtgcaactgct
cattatggtgctgtgacaggattaaaagcaacagatgatggcatgtatctactaagtgca
gggtctgattcaagattgaggttgtgggatattgaatctggctgtgatactcttgtgaac
tttgaaacagtccgcctgcaaataaacaaacctatccaattagccaccactcaagattcg
gcctttgttttcgttccatgcatgagagctgtgaaagcatttgacatgtggtctgggaac
acagacgctatattgcgtggccactatgaatgtgtgaattcttgctggtttaatcaacaa
gatcaggaattgtacactggtggaaacgatagacaaattcttgtctggtcacctgctaga
tcaatcgttgatgaaatggatgaaggacctgctgatgatcaggatagctggagcaactga
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