Abrus precatorius (Indian licorice): 113865458
Help
Entry
113865458 CDS
T07330
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113865458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aprc03021
]
113865458
03036 Chromosome and associated proteins [BR:
aprc03036
]
113865458
Transcription machinery [BR:
aprc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113865458
Coactivators
SAGA/TFTC/STAGA complex
113865458
Chromosome and associated proteins [BR:
aprc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
113865458
STAGA complex
113865458
TFTC complex
113865458
SAGA complex
113865458
SLIK complex
113865458
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_EIPR1
Ge1_WD40
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_DCAF12
PROPPIN
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_VPS8
LisH
PALB2_WD40
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
113865458
NCBI-ProteinID:
XP_027355815
UniProt:
A0A8B8LHU6
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MEEDEIVGYVTAYLKKKGFTQTEKIFQEEFQHNKSNSSATSLLEPDIANHLLAFSQLESG
PARFHDGYSKLRSWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQEARNFFTTFRED
HEMMHLRDLQKLEGVLSPTHLEEMEFAHALRQSKFNIKICEYSYELLLQHLHSTQSTTIL
GIINEHINFQVTPGQPSLISDDPEAVTLTGSSQEAANRINQKEIHWGLLEDSLEERLEKA
GALLSDSEKGEGETKEGENDESKKRSIEGGKQGASVKKVKKDKGGGATGKGAKSEANTVP
AAPRVKPELPLPIIPTEVEQSILEDLRNRVQLSNVALPSVSFYTFINAHNSLSCSSISHD
GSLVAGGFSDSSLKVWDMAKLGQPTSSLSQGENDTSQNEQMFGQSGSKRQYTLFQGHSGP
VYAASFSPVGDFILSSSADSTIRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASSSH
DRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSIDKTVRLWDVQSGECVRVF
VGHRGMILALAMSPDGRYMASGDEDGTIMMWDLSSGRCLTPLIGHTSCVWSLAFSSEGSV
LASGSADCTVKLWDINTSTKVSRTEEKSGNANRLRSLKTLPTKSTPVYSLRFSRRNLLFA
AGALAKTC
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacgaaatagttggatacgttactgcgtaccttaagaaaaaagggtttacg
caaacggagaagattttccaggaagaatttcaacacaacaagtccaattcctctgctact
tctcttctcgaacccgacattgccaatcatctccttgccttctctcaattggagagtggt
cctgccaggtttcatgatggatatagcaaactacgatcgtggacttattcttctctggat
ttgtataagcacgagttgcttcgtgtactttatccagtgtttatacattgctttatggat
cttgtggcaaagggacatattcaggaagctcggaactttttcactacctttcgtgaagac
catgaaatgatgcacttgcgtgaccttcaaaagctggaaggtgttctttctcctactcat
ctggaggaaatggagttcgctcatgcacttaggcagagcaaattcaacataaagatatgc
gagtattcctacgaacttctgttgcaacatctacacagtacacaatccaccaccatactt
ggtattatcaatgagcatattaactttcaagttactcctggacaacctagcttgatttct
gatgatccggaagctgttacccttactggaagcagccaggaagcagctaaccggataaat
caaaaagaaattcattgggggttacttgaagactctctagaagaaagactggagaaggct
ggggctttgctttcagactctgaaaagggtgaaggggaaacaaaagagggggagaatgat
gagagtaagaaaagatccattgaaggaggaaagcaaggtgcttcagtcaaaaaagtaaaa
aaggacaaaggtggaggtgcaaccggaaagggtgccaaatctgaagctaacactgtacct
gctgcacctcgagttaagccagaactccccttgcccataatcccaactgaggtagagcag
tccatccttgaggatttaaggaaccgtgtacagcttagcaatgttgcattgccatcagtt
agcttttacacatttatcaatgcgcataatagtttaagctgttcatcaatatcccatgat
ggatcattagttgctggaggattttctgactcatcactgaaggtttgggatatggcaaag
cttggacaacccaccagttctctttcacagggtgagaatgacacatcacaaaatgaacaa
atgttcgggcaaagtggcagcaaaagacagtatacattgtttcaaggtcattcagggcct
gtttatgcagcatcttttagtcctgttggggattttattctttcatcctcagcagactca
acaattcgattatggagcacaaaacttaatgccaatcttgtttgttacaagggtcacaat
tatcctgtctgggatgttcagtttagtcctgtagggcattattttgccagctcctcgcat
gacagaactgctaggatttggtccatggacaggatacagcctttaagaataatggctggg
catttgtctgatgttgattgcgtgcaatggcatgccaactgcaactacatcgcaacaggt
tccattgacaaaacagttcgactctgggatgtgcagagtggtgagtgcgtccgggttttc
gttggtcacaggggtatgattttagctttggcaatgtctcctgatggtcgctatatggca
tccggtgacgaagatggcacgatcatgatgtgggacctctctagtggccgctgtctcaca
cctttgattggtcacacgtcatgtgtctggtcacttgctttcagttctgaaggttctgtt
ctagcatctggatctgctgattgcactgtaaaattatgggatataaatacgagcaccaag
gtttcaaggactgaagaaaagagtgggaatgctaacagactcagatcactgaaaactctg
ccaaccaaatctactccagtttactctttgcggttttctcgaaggaatcttctttttgct
gctggagctctagcaaaaacttgctga
DBGET
integrated database retrieval system
