Abrus precatorius (Indian licorice): 113865544
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Entry
113865544 CDS
T07330
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 56-like isoform X1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03013
Nucleocytoplasmic transport
aprc03015
mRNA surveillance pathway
aprc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113865544
09122 Translation
03013 Nucleocytoplasmic transport
113865544
03015 mRNA surveillance pathway
113865544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113865544
03041 Spliceosome [BR:
aprc03041
]
113865544
Enzymes [BR:
aprc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113865544
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113865544
Spliceosome [BR:
aprc03041
]
Complex C
Other components
EJC/TREX
113865544
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
113865544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
113865544
NCBI-ProteinID:
XP_027355981
UniProt:
A0A8B8LHY4
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MGETKDEGYEEELLDYEEEEDKAPDSVGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRA
IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVL
CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILAL
TREKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVC
KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSR
AAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIV
INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSTDVDVLNNVQSRFEVDIKQLPEQID
TSTYMPS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaacaaaggacgaaggatacgaggaagagcttcttgactacgaggaggaagaa
gacaaggcccctgactctgtcggagctaaagtcaacggcgaggctacaaagaagggctat
gttggaattcacagttcaggattcagagactttcttttgaagccagagcttcttcgggct
attgtggactcgggatttgagcatccttccgaagtgcaacacgagtgcatacctcaagcg
attctcggaatggatgtaatttgccaagcaaaatctggaatgggaaagactgctgtcttt
gttctctcaacgttgcagcagattgatcctgttcctggccaagtttctgctcttgttcta
tgccacacaagagaattggcataccagatatgccacgagtttgagaggtttagtacctat
ttaccagatctaaaggttgctgtcttttatggtggggtcaatatcaaagttcacaaggat
ctgttgaaaaatgaatgccctcatattgttgttggaacacctggtagaatactagcattg
actagggaaaaggacctttcgttaaagaatgttaggcatttcattttagatgaatgcgac
aagatgctggaatcactagatatgaggaaagatgttcaagacattttcaagatgactccc
catgataagcaagttatgatgttttctgcaacactcagcaaggaaattcgcccagtctgc
aagaaatttatgcaagatccaatggaaatttatgttgatgatgaggccaagctgaccctt
catggacttgtgcagcactacatcaaattgaaagaggaggagaaaaatcggaaactgaat
gaccttcttgatgcactggacttcaatcaagttgttatctttgtgaaaagtgttagtaga
gcagctgagctggacaaattgcttgtggagtgcaactttccatctatatgcattcactct
ggcatgtcccaagaagaaaggttaaagcgatataaaggtttcaaggaggggcatacaagg
attcttgttgcaacagatttggttggaagagggattgacattgaacgtgtcaacattgta
ataaactatgacatgcccgattctgcagacacatacttgcacagggttggccgagctgga
agatttggcaccaaaggccttgcaatcacatttgtttcatgttctactgatgttgatgtt
ctcaataatgttcagtcaaggtttgaggtggatataaaacagcttcctgagcagattgat
acctctacctatatgccatcatag
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