Abrus precatorius (Indian licorice): 113867301
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Entry
113867301 CDS
T07330
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113867301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113867301
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113867301
mRNA degradation factors
5'-3' decay
Decapping complex
113867301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_HPS5
GerPC
Egg_lysin
Motif
Other DBs
NCBI-GeneID:
113867301
NCBI-ProteinID:
XP_027358344
UniProt:
A0A8B8LTY4
LinkDB
All DBs
Position
Unknown
AA seq
1421 aa
AA seq
DB search
MASPGNPNQQQQQQHSQTTHFDLQKLFKATTAAATTTSSSSPSPTIPNPLPSSNLNSSPS
FPAPSPSTPPPSSYPTPSSSYPPPTGTYPYHHPHFLPYPTLHHHQQQQEHPLILHHLPQM
HAPQRSPIFQAPSPSPSSPHLPSSPNPTNTTSGARLMALLGTQNPPSNQDSSVVYSSSST
SSPSPVVSDFSMPSNPAVLPPTLSSASPVNLASPQSTPTRMLSSKLPKGRHLMGEHVVYD
IDVRMPGEMQPQLEVTPITKYASDPGLVLGRQIAVNRSYICYGLKLGAIRVLNINTALRY
LLRGHTQRVTDMAFFAEDLHLLASASTDGRIFIWKINEGPDEEDKPQITGKVILAIQILG
ESESVHPRVCWHPHKPEILMVAIGNRILKIDTMKAGKGETFSAEEPLKCSVDKLIDGVHL
IGKHDNNVTELSMCQWMKSRLASASADGTVKIWEERKSTPLAVLRPHDGKPVNSVTFLTA
PHRPDHIVLITTGPLNQEVKIWVSDNEEGWLLPSDSESWNCIQTLDIRSSSEANPEDAFF
NQVVALPRAGLFLLANAKKNTIYAVHIEYGPNPTATRMDYIAEFIVTMPILSLTGTSDSL
PDGEHIVQIYCVQTQAIQQYGLNLSQCLPPPLDNVELEKTDSNLSRAFDALDGSTNLETG
NMAQLQPSSSESTPIVSPAVNLPSDISGLPEASVSSISDTETKPNELPSRNGFEHIHTAP
PPLPLSPRLSQKLSGFKNSSNNLETSSMTADHSSEQANLDSSEQRRMESEKDNIADVPAS
GDNLRKDDKIVQNDVSVVSNAPTTFKHPTHLVTPSEIFSKTALSSDNSHTSQGMNVQDVA
AHSNAENFEVEVKVVGETGSNQEKTDYERERDSHTNVAERKEKLFYSQASDLDIQMARET
YNIEGVRQADNTKTIDAPDQSCSSVEEEAQDTSKDVPTSISESETVAVAVQSPAPAVKGK
RQKGKNSQVSGASSSSPSPFNSTDSSNDQGGNSGGTSMEAALPQLSAMQEMMGQLLSMQK
EMQKQMNGMVSVPVTKEGKRLEGSLGRNMEKVVKAHSDALWARLQEENAKQEKLERDRMQ
QITNLISNYVNKDMASLLEKIIKKEISSIGTTITRSISQIIEKTISSSVTESFQKGVGDK
ALNQLEKSVSSKLEATVSRQIQAQFQTSGKQALQEALRTSLEASIIPAFEMSCKAMFEQI
DVAFQNGLVKHATAIQQQYDSTHSPLAMTLRDTINSASSITQTLSGQLADGQRKLLAIAA
NSNVASDPFVAQINNGLHEMTEDPTKELSRLISEGKFEEAFTGALHRSDVSLVSWLCSQV
DLAGILSMVPLPLTQGVLLSLLQQLSCGINTDTPRKLAWMTDVAAAINPADPRIAAHVRR
ILDQVYRTLGHHRTLPTTSPSEASTIRLLMHVINSVLLSCK
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcctgggaatccaaatcaacagcagcaacaacaacattcacaaacaacccat
tttgatttgcagaagctttttaaggcaacaacagcagcagcaacaacaacatcatcatca
tcaccatcacccactatacctaatcccttaccttcttcaaatttgaactcttctccatca
ttccctgctccttctccttcaacaccccctccttcttcctaccctaccccttcttcttca
taccctccacccactggcacatacccttatcatcatcctcactttcttccttatccaacc
cttcaccaccatcaacaacaacaagaacaccctcttatcctccaccaccttcctcaaatg
catgctccacaaagatcccccatttttcaagccccttctccttctccatcctcacctcac
cttccttcatcaccaaatccaaccaataccacatctggtgcacgcctaatggccttgttg
ggcacccaaaaccctccttccaatcaagattcatcggttgtgtattcatcttcttcaaca
tcatcgccatcacctgtggtttctgatttttcaatgccaagtaaccctgcagtgttgccc
cccacactatcctcagcttctcctgtgaatctggcaagtcctcagtccacaccaacaagg
atgctgagcagcaagctcccaaagggacgccatttgatgggagagcatgttgtttatgac
attgatgttaggatgccaggggagatgcagcctcagcttgaagtcactccaatcaccaag
tatgcctctgatcctggccttgtccttggccgccaaattgcagtcaatagatcttacata
tgctatggacttaaactcggcgccatcagggtccttaatatcaatactgcattaagatat
ttgcttcgaggtcatacacagagagtaacagacatggctttctttgctgaggatcttcac
ctgttggccagtgctagcactgatggaagaatttttatatggaaaataaatgagggccct
gatgaggaagataaacctcaaatcactggaaaagttatcctagccattcaaatattagga
gagagtgagtcagttcatccacgagtatgctggcatccccacaaaccagaaattttaatg
gttgctattggaaatcgtatcctcaaaattgacactatgaaagctggaaaaggtgaaact
ttttctgcagaggagcctctcaaatgttctgttgataagttgattgatggggtgcatctt
attggcaagcatgacaacaatgtgactgaattgtcaatgtgccaatggatgaagagtcga
ttagcttcagcatcagctgatggcacggtaaagatatgggaagaacgtaagtcaacacca
cttgctgttttaagaccacatgatggtaaacctgttaattctgtgacattcttgactgct
cctcaccgccctgatcacattgtccttatcacaacggggccactaaatcaggaagtgaag
atatgggtctccgataatgaggaaggctggctattgcctagtgattctgagtcatggaat
tgtattcagactttggatataagaagttcttctgaagccaaccctgaggatgcattcttt
aatcaagttgtagcattgccccgtgctggtttgtttctgctagcaaatgccaagaaaaat
acaatatatgctgtgcacatagagtatggacccaatccaactgctacccgcatggattac
attgctgagttcatagtcacaatgcctatattaagtcttaccggaactagtgatagttta
cctgatggagagcatattgtacagatatattgtgtccaaacacaagctattcaacagtat
ggactcaatttgtcacaatgtttacctccacccctggacaatgttgaacttgagaaaaca
gattccaatctatctcgtgcctttgatgctttggatggatctactaatttggaaactgga
aatatggcacaactacaacctagcagttctgaaagtactccaattgtgagccctgctgta
aacttgccttcagatatttctggtctgcctgaggcttctgtatcttccatttcagataca
gagaccaagccaaatgaattaccttctcgtaatggttttgaacatatccacactgctcca
cctccacttcctttgagtccaagattgtcccagaagttatctggtttcaaaaattcatca
aataatttagagactagttcaatgaccgctgatcacagcagtgagcaggcgaatcttgat
tcttcagaacaaaggagaatggagtctgaaaaagataatatagcagatgtgcctgcatca
ggtgacaatttgcgaaaggatgataaaattgtacaaaatgatgtttctgtggtttctaat
gcccctactacatttaaacacccaacccatttggtaactccatccgagatattctccaaa
actgctctatcttctgacaattcccatacttctcaaggtatgaatgttcaagatgtggct
gcccatagcaatgcagaaaactttgaagtagaggttaaagttgtaggtgagacaggttct
aatcaagaaaaaactgactatgaaagagagagagactcacacaccaatgttgccgagagg
aaagagaagttattctattctcaggcctctgatctggacattcagatggctagagaaacc
tacaatattgagggagttcgtcaggctgataatactaagactattgatgcacctgatcaa
agttgtagctctgttgaggaagaagctcaagacacgagtaaggatgtacctacaagcatc
agtgaatcagaaactgtggctgttgctgtgcagtctccagcacctgctgtgaaaggtaaa
agacaaaaaggaaaaaattctcaagtgtctggtgcatcttcctcttctcccagtcctttt
aactcaacagattcatcaaatgatcaaggtggcaattcaggaggcacatccatggaggct
gctttaccacagttatctgctatgcaggaaatgatgggccagttattaagcatgcagaag
gaaatgcaaaagcagatgaatgggatggtttctgttccagttaccaaggaaggcaaaaga
ttagaaggatccttgggtagaaacatggagaaagttgtcaaggctcacagtgatgctttg
tgggctcgcttacaagaagaaaatgcaaagcaagagaagttagagcgagatcgtatgcag
caaataactaatttgatctccaattatgtaaacaaggacatggcatctctattggagaaa
atcattaagaaggaaatatcttcaattggaacaaccattactcgttcaattagccaaatt
atagagaaaacaatatcatcaagtgttacagagtcattccagaagggggtgggagacaag
gcattgaatcaactagaaaaatcagttagttctaaacttgaagctacagtgtctaggcag
atacaagcacaatttcaaacctccggcaagcaagctcttcaggaagcacttaggactagt
ttggaagcctcaatcattcctgcatttgagatgtcctgcaaagcaatgtttgagcaaatt
gatgtagcatttcagaatggacttgtgaagcacgcaactgctattcaacagcagtatgat
tctactcattctccactggccatgactttgagggatacaattaattcagcatcatcaatc
actcaaactttgagtggacaattggccgatggccaacgtaaactgttagcaatcgcagct
aactccaatgtagcttcagatccatttgtggcacaaatcaacaatggcttgcatgagatg
actgaggatcctaccaaagaattatcaaggttgataagtgagggaaaatttgaagaagca
tttactggagcccttcatagaagtgatgtttcgctagtttcttggttatgttctcaggtt
gatttagctggtattttgtcaatggtgccgctgccattaacccaaggagtacttctttct
cttctacagcagttgtcctgtggcatcaatacagatacacccagaaaattagcatggatg
acagatgtggctgctgctataaacccagcagatccgaggattgcagcacatgtgcgacga
atattggatcaagtgtaccgaacactgggccatcatcggactttaccaactacctcccct
tcggaagcaagcacaatccgccttctcatgcatgtcataaactcagtgttgttgagctgt
aaatga
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integrated database retrieval system
