Abrus precatorius (Indian licorice): 113868771
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Entry
113868771 CDS
T07330
Name
(RefSeq) carbon catabolite repressor protein 4 homolog 4 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113868771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113868771
Enzymes [BR:
aprc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
113868771
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113868771
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113868771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
113868771
NCBI-ProteinID:
XP_027360451
UniProt:
A0A8B8LVP2
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MLKAVLAITRFSTRSVVRKMSYTPAFPKFVSFEGTDITKPDGFRFRLVSYNILAQAYVKS
ILFPHSPSPCLKWKLRSNAILTVLKNLRADFFCLQEVDEYDSFYKGRMQELGYSSVYMKR
NGQKRDGCGLFYKNDRAELVLEEKIEYNDLVKLVQNGNSSKDDEHSNVQTVQPDEQTDVA
PKNGPKLNIEDRGDPNDPSVRLKRNCVGIMAAFKLKDPSCHVIVANTHLYWDPEWADVKL
AQAKYLLSRLAKFKTLVSDRYECTPEVIVAGDFNSMPGDMVYQYLVTGNPSSKLMPNCLD
EPPPIPLCSVYASLRGEPPFTNYTPGFTGTLDYILFSPSNRIKPISFLQLPDSDATDIVG
GLPNFSYPSDHLPIGAEFEIIKE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaagctgtgctagctattactcgcttttccacaagaagcgttgtgaggaagatg
agttacaccccagcatttcccaagttcgtttcctttgaaggcaccgacataactaagcct
gacgggttcagattccgtcttgtctcgtataacatattggctcaggcttatgtgaagagt
attctgttcccacactctccttccccttgtctcaagtggaaacttcgttcaaacgcaatt
ttaacagttcttaagaacttgagagctgattttttctgcctacaggaagttgatgagtac
gatagcttttacaaaggaagaatgcaggagttaggatattcttctgtttatatgaagaga
aatgggcagaagcgtgatgggtgtgggttattttacaagaatgatcgtgcagagttggtc
ctggaggagaaaattgaatacaatgatcttgtaaagttagttcaaaatgggaactcttca
aaagatgatgaacacagcaatgtccagacagttcagccagatgaacaaacggatgtggca
cccaaaaatgggcctaaattgaatatagaagatcgtggagatcccaatgatcctagtgtg
agactaaagcgtaactgtgttggaattatggctgcattcaaactcaaagatccctcctgt
catgttattgtggccaacacacatctttattgggatcctgagtgggctgacgtcaagctt
gcacaagctaaatatcttctatctcgtttagcaaaatttaaaacactggtatcagatcga
tatgaatgcacacctgaagtcattgtggctggtgacttcaattctatgcccggagatatg
gtttatcaataccttgtaactggcaacccttcatcaaaacttatgcctaactgtttagac
gagcctcctcctattcccttatgtagtgtctatgcttctttaagaggagagccaccattt
acaaactacacacctggcttcactggaacactggactatatattattttccccctccaac
cgcattaaaccaattagttttcttcagcttccagactctgatgcaactgatattgttggc
gggctgccaaacttcagttatccaagtgatcatcttccaattggtgctgaatttgaaatc
atcaaggagtaa
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