Abrus precatorius (Indian licorice): 113869351
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Entry
113869351 CDS
T07330
Name
(RefSeq) 30-kDa cleavage and polyadenylation specificity factor 30
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113869351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aprc03021
]
113869351
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113869351
Transcription machinery [BR:
aprc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113869351
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113869351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
zf_CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_12
Torus
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
113869351
NCBI-ProteinID:
XP_027361444
UniProt:
A0A8B8M2N2
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MEDSEGVLSFDFEGGLDAPPASTVVAASAAGPLVQHDSSAAASAVANGGAAAPSPADPAA
GNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKH
TNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNASNKFFQQ
RGASYTQQVEKSQLPQGINSTNQAVAGKTLPAESGNAQQQQQVQQSQQQVSQNQVQSVAN
GQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENV
ILIFSVNRTRHFQGCAKMTSRIGGSVTGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR
HLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEEKAKGV
NPDNGAENPDIVPFEDNEEEEEEESDEEEESFGHGVGPAGQGRGRGRGMMWPPHMPLGRG
ARPIPGMQGFNPVMMGDGLSYGPVAPDGFGMPDLFGVGPRAFAPYGPRFSGDFAGPPAAM
MFRGRPSQPGMFPGGGFGMMMNPGRAPFMGGMGVAGANPPRAGRPVNMPPMFPPPPPLPQ
NANRVAKRDQRTNDRNDRYGPGSEQGKSQDMLSQSGGPDDDMQYQQGYKANQDDQYPAVN
NFRNDDSESEDEAPRRSRHGEGKKKRRGVEDVNTSSNH
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccgagggagtcctcagcttcgattttgagggcggcctcgacgcccctccc
gcctccaccgtcgtcgccgcctccgccgctggacccctcgtccaacacgactcctccgcc
gcagcttctgctgttgctaacggaggcgcagcagctccctcccctgctgaccccgccgcc
ggcaacgtccccggacggcggagcttccggcagacggtgtgccgtcactggcttcgcagc
ctctgcatgaaaggcgacgcgtgcgggttcttgcaccagtacgacaaagcgcggatgccg
gtgtgccggtttttcagactctatggagagtgccgagaacaggattgcgtgtataagcac
actaatgaagatatcaaggagtgtaacatgtacaagttgggattttgtcctaatgggcct
gattgtcgatataggcatgcaaaatctcctggacctccacctcctgttgaagaggtcctt
caaaagatccaacatttatattcttacaattataacgcctctaataaatttttccaacaa
aggggtgctagctatactcaacaagttgaaaaatcccagcttcctcaaggaattaattct
actaaccaagctgtggctgggaaaacattaccagcagagtcaggaaatgcccagcagcag
caacaagttcaacagtctcagcagcaggtcagccagaaccaagtgcaaagtgttgctaat
ggccagcctaatcaagccaatagaactgcaacccctttacctcaaggaatatctaggtat
tttattgttaaaagttgcaatcgggaaaatttggagttatctgtacaacaaggagtatgg
gcaactcaaaggagcaatgaatccaaactaaatgaagcatttgactctgtggaaaatgtg
atactaattttctcagtcaaccgaactcgacatttccagggatgtgcaaagatgacatcc
agaattggtggttctgttactggtgggaactggaaatatgctcatggaactgcacattat
gggcggaatttctctgttaagtggttgaagttatgtgaactgtcattccacaaaactcgc
catttaaggaatccatacaatgagaacttgccagtgaagataagcagagattgtcaggag
ctggagccatccattggagagcagctggcatccttgctatatcttgagccggatagtgag
cttatggctatctcagttgcagcagagtctaaacgggaagaagagaaagcaaaaggagtg
aatccagataatggagcggaaaatccagacattgtcccatttgaagacaatgaagaagag
gaagaggaggaaagtgatgaagaggaggagagttttggtcatggtgtagggccagcgggt
caaggcagaggtaggggcagaggtatgatgtggccgcctcatatgccccttgggcgtgga
gctagacccatccctggaatgcaaggttttaaccccgtaatgatgggtgatgggttatcc
tatggacctgttgcacctgatggttttggtatgccagatcttttcggtgtgggtccccga
gcttttgctccgtatggtcctaggttctctggtgattttgcagggcccccagcagccatg
atgtttcgtgggcgaccctctcaacctgggatgtttccaggaggtgggtttgggatgatg
atgaatcctggacgtgctccctttatgggggggatgggggttgctggtgcaaatccacca
agagctggtaggccagttaatatgcctccaatgtttccaccacctccacctctacctcag
aatgcaaaccgcgttgccaaacgagatcaaagaactaatgatcggaatgataggtatggt
ccaggatcagagcaaggtaagagtcaagacatgctcagtcaaagtggtggacctgatgat
gacatgcagtatcagcaaggatacaaagcaaaccaggatgatcagtatcctgctgtgaac
aacttcaggaatgacgatagtgaaagtgaggatgaagcgcccagacggtcaagacatggg
gaggggaaaaagaaaaggcgaggcgtagaagatgttaacacaagctctaatcattag
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