Abrus precatorius (Indian licorice): 113869989
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Entry
113869989 CDS
T07330
Name
(RefSeq) DNA-directed RNA polymerase II subunit 1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03020
RNA polymerase
aprc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113869989
09124 Replication and repair
03420 Nucleotide excision repair
113869989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aprc03021
]
113869989
03400 DNA repair and recombination proteins [BR:
aprc03400
]
113869989
Enzymes [BR:
aprc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113869989
Transcription machinery [BR:
aprc03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
113869989
DNA repair and recombination proteins [BR:
aprc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113869989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
MIF4G_like_2
DUF5938
Motif
Other DBs
NCBI-GeneID:
113869989
NCBI-ProteinID:
XP_027362373
UniProt:
A0A8B8M352
LinkDB
All DBs
Position
Unknown
AA seq
1841 aa
AA seq
DB search
MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI
DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILAEENDHK
FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTEEPVKKSRGGCGAQQPKITI
EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR
PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS
EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
LLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKPIN
LIRYSSWHNESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIRDAQEKKL
EAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT
ACVGQQNVEGKRIPYGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK
LDSLKMKKTEFDRVFRYEFDDENWKPSYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQ
LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVP
GEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASG
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK
PEVGKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV
ALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
NDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKVQKFDESEGFKP
HEEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH
LRGVTENIMLGQLAPIGTGECALYLNDEMLKNAIELQLPSYMDGLDFGMTPARSPISGTP
YHEGLMSPSYLLSPNLRLSPTSDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT
SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYS
PSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDY
SPSSPQFSPSTGYSPSQPGYSPSSTSQYTPQTSDKDDRSTR
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atggatatacgattccctttctctccggcggaggtcgccaaagttcgcatggttcagttt
ggaatactgagtcctgacgagatcaggcaaatgtctgtggtgcaaatcgaacacggcgag
acaacggagaggggtaagccaaaggtcggaggattgagtgaccctcggcttggaactatt
gacagaaagttgaagtgtgagacttgtacggctagtatggctgagtgccctggtcacttt
ggccacttggagcttgccaagccaatgttccacattgggtttttgaagactgtgttaact
ataatgcgttgtgtttgcttcaactgttctaaaattctggcggaagagaatgatcataag
tttaagcaagctttaagaatcaggaatccaaaaaataggctgaaaaaaattctggatgct
tgcaaaaacaaaagcaagtgtgaagggggagacgagattgacattcctggtcaagatact
gaggagcctgtcaagaagagtcgtggtggctgcggtgctcagcaaccaaagattactatt
gaggggatgaaaatgattgctgagtataaagcgcaaaggaagaaaagtgatgatcaagaa
cagcttcctgaacctgtagaaaggaaacagactctttctgcagaaagggttcttggtgtt
ctgaaaaggataagtgacgaggactgtcagttgttgggcttgaatccaaagtacgcccgt
cctgactggatgattttacaagttcttccaattcctcctccacctgtgaggccttctgta
atgatggacacatcctccagaagtgaggatgatttaactcatcagctggctatgatcatc
aggcacaatgagaatctgaagagacaggaaaggaatggatctcctgcacatattatttca
gagttcgctcagttattacagttccacatagcaacatattttgataatgaattgccagga
ctgccaagggctactcaaagatctggaaggcctatcaaatcaatatgtagcaggctcaag
gcaaaagagggccggattagaggtaacttgatgggtaaaagagttgatttttctgctcgt
acagtaattacacctgatccaacgatcaatatcgacgaattgggagtaccctggagtatt
gcattgaacctcacataccctgagactgtgactccatataacattgaaaggttgaaggaa
cttgttgagtatggaccccatcctccacctggaaaaactggtgccaagtatatcattcgt
gatgatgggcaaaggcttgatctcagatatttgaagaaaagtagtgatcaccatttggag
cttggatacaaggtggagcgtcatttgaatgatggagattttgttctcttcaatcgtcag
cctagtcttcataaaatgtctatcatgggacatagaatcaaaatcatgccatattctact
ttccggctgaacctatctgtaacttcaccatataatgctgattttgatggcgatgaaatg
aatatgcatgttcctcagtcttttgaaaccagagctgaggtgttggagctgatgatggtg
cctaaatgcattgtatcgcctcagtcaaacaggccagtaatgggaattgtccaagataca
cttttaggatgcagaaaaatcaccaagagagatactttcatcactaaggatgtttttatg
aatattttgatgtggtgggaagattttgacgggaaagttcctgctcctgcaatattgaag
ccagaaccactgtggactgggaaacaagttttcaatctcatcattcctaaaccaataaat
ctaattagatattctagctggcacaatgagagtgaaaggggatccataacccctggggac
accatggtcagaattgaaaaaggggaactacttactggaacactttgcaagaagacactt
ggaacttctactggaagtctcattcatgtgatttgggaagaggtgggccctgatgcagct
cgtaaatttcttggtcatactcagtggctcgtgaactactggcttttgcagaatgctttt
agcattggaattggtgatacaattgctgatgcttccactatggagactataaatcagact
atttcagctgctaaggagaaagtgaaacaacttatcagggatgctcaagaaaagaagttg
gaggctgaacctggtcggacaatgatggattcatttgagaatagggtgaaccagactcta
aatagagctcgtgatgatgctggaaatagtgcacaaaaaagtttatctgagagcaacaat
ctgaaagcaatggtgacagctggttccaaaggaagttttattaatatatctcagatgacg
gcttgtgtgggccagcagaacgttgagggtaagcgaattccatatgggttcgtagaccgg
actttgccccactttacaaaagatgattatgggcctgaaagtcgtggctttgtggagaat
tcatatctgcgtggactgacccctcaagagttcttttttcatgccatgggtggtagggaa
ggtcttattgatactgcagtgaagacctctgaaactgggtacattcagaggcgacttgtg
aaggctatggaggacatcatggttaaatatgatgggacagttagaaactctttgggagat
gtcatacaatttctctatggagaagatggtatggatgctgtttggatagaaacacagaag
ctggattccctcaaaatgaaaaaaacagaatttgatagggtttttagatatgagttcgat
gatgaaaactggaagcctagttacatgcttgaagagcctgtagaagacttgaaaaccatc
agagagtttcgtaatgtgtttgaggccgaagttcaaaagcttgaagctgatagatatcaa
ttggcaactgagatagcaactactggtgacagttctctgccactgcctgttaaccttaag
aggcttatctggaatgctcaaaagacctttaaggttgacttccgaaggccatctgatatg
catcccatggaaattgtggaagccattgataagctccaagagcgactcaaggttgttcct
ggtgaagatctcttgagtcaagaggctcaaaagaatgctacactcctgttcaatattctg
cttcgcagtacttttgccagtaaaagggtcctggaggaatacagactttcgcgtgaggca
tttgagtgggtagtgggagaaatagaatcaaggttcttgcagtcgcttgtagcctctggg
gaaatgattggttgtgtggcagcacaatcaattggtgagcctgccactcagatgactctc
aacactttccactatgctggtgtgagtgccaagaacgttactttaggagtccctaggtta
agggaaatcatcaatgtggcaaagagaatcaaaactccttctctatctgtgtacttgaaa
cctgaagttggtaagactaaagagagagcaaagagtgtgcagtgtgctttagaatatacc
actcttaggagtgtgactcaggctacagaggtgtggtatgatccagacccaatgagtaca
attattgaagaggatgttgattttgtgaagtcctactatgaaatgccggatgaagaagtt
gctcttgaaaaaatctcaccttggttgcttcgtattgagctgaatcgtgaaatgatggta
gataagaagttgagtatggctgacattgcggagaagattaaccttgagtttgatgatgat
ttgacttgtatatttaatgatgataatgctgaaaaacttatacttcgaatccgtattatg
aatgatgaggcacccaagggagagattcaggatgaatctgctgaagatgatgttttcttg
aagaaaatagaaagcaacatgctgactgaaatgaccttacgaggtatcccagacatcaat
aaagtctttataaaaaacactaaagttcaaaagtttgatgagagtgaaggttttaagcct
catgaggaatggatgcttgatactgaaggtgtcaaccttttagctgtgatgtgccatgaa
gatgttgatgcaagaaggaccacaagcaatcacttgattgaagttattgaagttcttggt
attgaggcagttcggcgggctctgctggatgaattgcgtgttgtcatttcttttgacggt
tcttatgtcaattataggcatttggctattctttgtgataccatgacttatcgggggcat
ttgatggcaattacacgccatggtatcaaccggaatgatactgggccaatgatgagatgc
tcatttgaagagacagttgatattctgcttgatgctgcagtgtatgctgagactgatcac
ttgaggggtgtcactgagaatatcatgttaggtcagcttgcccccattggcactggtgaa
tgtgccctgtatcttaatgatgagatgctgaagaatgctattgagcttcaactacctagt
tatatggatggtcttgattttggcatgactcctgctcgatccccaatatctggaacccca
tatcatgaagggttgatgtctccaagttatttgttgagcccaaatttacgtctgtctcct
acttctgatgcccagttttcaccttatgtgggtgggatggcattttctcctacatcatct
cctggttacagtccatcctcaccaggatatagtccatcatctcctggttacagccccaca
tctcctgggtatagccccacatctcctggttacagccccacatctcctgggtacagccct
acctctccaacttacagtcctagctctccaggttatagtcctacaagtccagcttattca
cctacaagtccatcttactctcccacttcaccaagctatagccctacatcaccaagctac
agccccacatctcccagctacagccccacatctcccagctacagccctacatctcccagc
tacagccccacctcacctgcatacagccccacttctccagcttacagccctacttcacct
gcatatagtcctacttctccatcatatagcccaacatcaccttcgtatagtccaacttca
ccttcctacagccctacatcaccctcttacagtccgacttctccatcatatagtcctaca
tcccctgcatacagtcccacgtctcctggatacagcccaacatcgccttcatatagccca
acatctccatcatacagtcctacctcccctagttacaatccacagtcagcaaagtatagt
ccttcgttggcatattctcccagcagtccaagattgtctccatctagtccatatagtcct
acatctccaaactatagcccgacttctccatcatattcaccaacgtctccgtcttattct
ccttcaagcccaacatacagtcccagcagcccgtataattctggggtgagcccagactat
agcccaagctctccccaattcagtcccagtacgggttactcaccaagtcaacctggttac
tcaccgtcctcaaccagccagtacactccacagactagtgacaaggatgatagaagcact
cgctga
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integrated database retrieval system
