Abrus precatorius (Indian licorice): 113870861
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Entry
113870861 CDS
T07330
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113870861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aprc03041
]
113870861
03009 Ribosome biogenesis [BR:
aprc03009
]
113870861
Enzymes [BR:
aprc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113870861
Spliceosome [BR:
aprc03041
]
Complex A
U2 snRNP components
U2 related factors
113870861
Complex B
113870861
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
113870861
Ribosome biogenesis [BR:
aprc03009
]
Eukaryotic type
90S particles
Helicases
113870861
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
DEAD
Helicase_C
AAA_22
AAA_19
ResIII
nSTAND3
SRP54
ABC_tran
Cas3-like_C_2
T2SSE
AAA_7
AAA_30
Flavi_DEAD
FtsK_SpoIIIE
AAA_SelU
TsaE
nSTAND_NTPase5
NACHT
PhoH
Motif
Other DBs
NCBI-GeneID:
113870861
NCBI-ProteinID:
XP_027363172
UniProt:
A0A8B8M606
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MGTERKRKVSLFDVVDDGAAKMAKSNGANSLVNRWNGKPYSQRYCEILEKRKSLPVWQQK
EEFLQVLKDNQTIILVGETGSGKTTQIPQFVLEAVDIETPDKRRKMMIACTQPRRVAAMS
VSRRVAEEMDVNIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIILD
EAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVE
IFYTQEPERDYLEAAIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEISNMGDQVG
PVKVVPLYSTLPPAMQQKIFEPAPPPLKEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPG
FAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTERSFNNDLQPQTYP
EILRSNLANIVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTKLGE
IMSEFPLDPQMSKMLVVSPEFNCSNEILSVSAMLSVPNCFVRPREAQKAADEAKARFGHI
DGDHLTLLNVYHAYKQNNEDPSWCYDNFVNHRALKAADNVRQQLVRIMARFNLKLCSTDF
NSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYV
LTSRNFIRTVTDIRGEWLVDIAPHYYDLSNFPQCEAKRVLERLYKKREKEKEEARSLK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgagaggaagaggaaggtgagtttgtttgatgtggttgacgacggtgcggcg
aagatggcgaaatcaaatggcgctaacagcctcgttaaccgatggaacgggaaaccctat
tcgcaaaggtactgtgagattttggagaagaggaagagtctccccgtttggcagcagaag
gaggagttcttgcaggttttgaaagataaccagactatcattctcgttggtgagactggt
agtggcaaaaccactcagatccctcagtttgtcttggaagctgttgatatagaaacccca
gataaacgcaggaagatgatgattgcttgcactcagcctcgtagagtggctgcaatgtct
gtttccaggcgtgtggcagaggagatggatgtgaatatcggagaagaggttggttacagc
atcagatttgaagattgcagtagtgcaaggacagttttgaagtatctcactgatggtatg
cttttgagagaagcaatgacagatccacttttggaacgatacaaggtaattattcttgat
gaagcacatgaaaggactttggctacagatgtgctatttggccttcttaaggaagtgctt
aaaaatagacctgacttgaagttggttgttatgagtgcaacacttgaagctgaaaagttc
cagggttatttttatggggcccctcttatgaaagttcctggaagactgcatcctgtggaa
atcttctatactcaggaaccagaaagggattacttggaggctgctattaggacagtggtg
cagatacacatgtgtgaaccttctggagatatacttgtttttctcactggagaggaagag
atagaagatgcatgtcgcaaaataacaaaagaaatttcaaatatgggtgatcaggtgggg
cctgtgaaagtggtacccttgtattctactcttcctccagctatgcagcagaagattttt
gagccagcgccacccccacttaaggagggaggacctcctggaaggaagattgtggtatca
acaaacatagccgaaacttccttgacaattgatggtatagtctatgttattgaccctgga
tttgctaagcagaaggtttataaccctcgagtccgtgtggagtctttgttggtgtcacca
atatcaaaggctagtgcacaccagagatctggacgtgctggaagaactcagccaggaaaa
tgttttagactttatactgaaagaagtttcaataatgatctacagccacagacctatcct
gaaattttgagatctaatcttgccaacattgttcttaccttgaagaaactgggtatagat
gatttagtgcattttgattttatggaccctcctgcccctgagaccttgatgcgtgcatta
gaagtgttgaattacttgggtgcactggatgatgacggtaatttaacaaagttgggtgag
attatgagtgaatttcctttggaccctcaaatgtcaaagatgctcgttgttagtcctgaa
ttcaactgttcaaatgagattctttccgtttctgccatgctatcagtacccaattgcttt
gtccggcctagagaggcacaaaaagctgcggatgaagcgaaagctaggtttggacacatt
gatggagatcatctcacgctcttgaatgtatatcacgcatacaagcaaaataacgaggat
ccttcttggtgctatgataactttgttaatcatagggcgctgaaagcagctgataatgtt
agacaacaactagtgcgtatcatggctcggtttaacctcaagttatgcagcactgacttc
aatagtcgtgactactatgtcaacataagaaaagcaatgctagcaggatatttcatgcag
gtggctcatttggagcggacaggacattacttgacagtgaaagacaaccaggtggtgcac
ttgcatccatcaaattgcctggaccacaagcctgaatgggtaatatataatgaatatgtt
cttaccagtcggaattttattcggactgtgacagatatacgcggggagtggttagtggat
atagcaccccattactatgatttgtctaattttccacaatgtgaagcgaagcgtgttctt
gaaaggctttacaagaaacgagaaaaggaaaaggaggaagccaggagtcttaaatga
DBGET
integrated database retrieval system
