Abrus precatorius (Indian licorice): 113870935
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Entry
113870935 CDS
T07330
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113870935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aprc03041
]
113870935
03009 Ribosome biogenesis [BR:
aprc03009
]
113870935
Enzymes [BR:
aprc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113870935
Spliceosome [BR:
aprc03041
]
Complex A
U1 snRNP components
U1 related factors
113870935
Complex B
113870935
Ribosome biogenesis [BR:
aprc03009
]
Eukaryotic type
Pre-60S particles
Helicases
113870935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
113870935
NCBI-ProteinID:
XP_027363313
UniProt:
A0A8B8M5R2
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MATAEAASAGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPAPLTPPLP
SGPAPMASVPSLAPIPVAHSMQSGGMVQQHGQQLVQVQPSQQQIGHHAQQHGQSMPQQQQ
QSPHLAHVAQQQPSQVAQSAQQQNLQLAQPQPGLHQARQQMMQPQGQQMMQPQGQQMHPQ
MLPQAIHSKHFGQGTPQDHGSHVVQPQAHQFTPQNMQYMSYQQNMITSRQPPNSLQPNMV
SPGQPNSQQIQHNIHSQPFENQQTVFPKIEEVEFKNGSQVRLSPSQYQQRSGLPVQNNQS
IPGEANSGQVPNIGANAGQPPQFRALSGSVQQSPSAMQPQQGGPDLFYPHGPNFQNQMSA
GMMHGHPSNVHPVGQKMGHEDNLRGRAGNEYYYNSNKDMSTMGRQQPNMAQIPIPRNQQD
MRVGNAPFQTVMPSGNGSGIAGNAVHSMFAPPIGGPSPLSTNSLMRPPYMGSSDVTDLSP
AEIYCQQHEVTATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGR
DIVAIAKTGSGKTLGYLIPAFILLRQRHNNSLNGPTVLVLAPTRELATQIQDEVIKFGRS
SRVSCTCLYGGAPKALQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRM
LDMGFEPQIRKIVNEIPPHRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKA
ITQYVEVVPQMEKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSIGRSFGAAAIHGDK
SQGERDWVLSQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRA
GATGVSYTFFSEQDWKHAGDLIKVLEGANQHVLPELRQMALRGPPNFGKDRGGISRFDSA
GGVGGRWEAGGRGGGMRDGGFGGRGGGMRDGGFGGRGGGGMRDSGFGGRGGGMRDGGFGG
RGGMRDGGFGGRGGMRDGASGQGGRGDFFPGRGNRGRGSGGPRGGHISWGRGERGMDDRY
NMDGRGQGRGRGRGRFDNRRDVSYRNRARSYSGSPERVRTWDYSRSRSRSRSRSRSWSRG
RSRSRSWSRGRSRSYSRSISPRRSHSRSRSRGRSYSRSPSRSHSPSYDKRDRSDQQLSDQ
KDLHEAGASDPSMFTMSPGTHGNPFLGTENVEQQPAIGSNDPDNPEAVADLGHQSASDI
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcggaggcagcttctgctgggcttggtcccagatatgcacctgacgatccc
acccttccacaaccgtggaaggggttgattgatggaagcactggtctgttatactattgg
aatcctgaaactaatgttacacagtatgaaaaaccagctcccttgaccccacctttgccg
tctggccctgcacctatggcttctgtgccgagcttggcgcctatacctgttgctcattca
atgcagtctggtgggatggtgcaacagcatggacagcagttggtgcaagtgcaaccctca
caacagcagattggtcaccatgcccaacagcacggtcaatcgatgccgcagcagcaacag
cagagtccccatttggcgcatgttgctcagcagcagccctctcaggttgctcaatctgca
cagcagcagaacttgcaactggcgcagccacagcctgggttacatcaagccagacagcag
atgatgcagccccaaggacagcagatgatgcagcctcaaggacagcaaatgcatcctcag
atgctgccgcaggcaatccattccaagcatttcgggcaaggaacacctcaggatcatggc
tcgcatgttgtacaaccacaagcacatcaattcactccccagaacatgcaatatatgtca
tatcagcaaaatatgattacatctaggcaaccaccaaactcccttcagccaaacatggtc
tcacctgggcaacctaactcccagcagattcaacataacatacatagtcagccctttgaa
aatcaacaaacagtatttccgaagatagaggaagtggaatttaaaaatggaagccaggta
agactttcaccatcgcaatatcaacaaaggagtggcttgccagttcaaaacaaccaaagc
attcctggtgaagccaattctggtcaagtgcctaatataggtgccaatgctggccaaccg
ccgcaattcagggccttatcaggaagtgtgcaacagtctccctctgcgatgcagccacaa
caaggtggtcctgatttgttttaccctcatggtcctaactttcaaaaccagatgagcgca
ggaatgatgcatggtcatccatccaatgtacatcctgttggccaaaagatgggacatgag
gataacttacgtggtagagctgggaatgaatattactataattctaacaaagatatgtca
acaatgggtcgtcagcagccgaatatggctcaaatacccattccgagaaatcagcaggat
atgagggttggcaatgctccttttcaaactgtaatgcctagtggaaatggaagtggcatt
gctgggaatgctgtgcatagcatgtttgctcctccaataggaggaccttcacctctctca
actaactctttgatgaggcctccttatatgggatcttcagatgttactgatctctcacct
gctgaaatttactgtcagcaacatgaagttacagcaacgggtgacaacattccccctcct
ttcatgacatttgacgccactgggttccctccagagatcttgagagagatatattctgct
ggcttctcaaatccaacaccaatacaggctcaaacatggcctgttgcactacaaggtaga
gacatagtggcaattgccaaaactggctctgggaaaacattaggctacttaatccctgcc
ttcattcttcttagacaacgacataataattctctgaatggccccactgtattggttttg
gctccaacacgtgaacttgcaacacaaatccaagacgaggtcatcaaatttggacgatct
tcacgggtctcttgcacgtgcttgtatggtggagcacctaaagcccttcaactaaaagag
ttagatcggggagcagacattgttgttgccacacctggtcggctcaatgatattcttgaa
atgaagaaaattgactttgggcaagtttcacttcttgtgcttgatgaggctgaccgaatg
cttgatatgggttttgagcctcaaatacgtaagattgtgaatgagattccaccacacaga
caaactctcatgtacacagcaacctggccaaaagaagtaagaaaaattgctagcgatctt
cttgttaatcctgtccaggttaacattggaagtgtggatgagcttgctgcaaataaagct
atcacacagtatgttgaagttgtcccacaaatggagaaacagaggcgtttggagcaaatc
ctcagatcccaagaacgaggttctaaggtcataatattttgttccacaaagaggttatgt
gatcagcttgcccgtagtattggccgcagttttggggctgctgcaattcatggagacaag
tctcaaggtgagagagactgggttttaagtcagttccgcagtggaaagtcaccaattctg
gttgccactgatgttgctgctcgtggacttgatattaaagatataagggtggtgatcaat
tatgatttccccactggaatagaggactatgtgcaccgtattggaagaactggaagggca
ggtgctactggagtgtcatatacctttttctctgagcaggactggaaacatgctggtgat
ctaatcaaagttttggagggtgctaaccagcatgtccttccagagttaagacagatggcc
ttgcgtgggccaccaaattttgggaaggatcggggtgggattagtcgatttgactctgct
ggtggtgttggtgggcgttgggaggctggtggtcgtggtggcggcatgagggatgggggc
tttggtggtcgtggtggtggcatgagagatggtggctttggtggacgtggtggcggtggc
atgagggacagtggctttggtggacgtggtggcggcatgagggatggtggctttggtgga
cgtggaggcatgagggatggtggctttggtggtcggggtggcatgagggatggagctagt
gggcaaggtgggagaggtgatttctttcctggtaggggcaacaggggcaggggatctggt
ggccctcgtggaggtcatattagttggggtaggggtgaacgtggtatggatgaccgatac
aacatggatgggcggggacaagggcgcggacgtggacgaggacgatttgacaatagaaga
gatgtttcttacagaaatagagccagaagttatagcggtagccctgaaagagtcagaaca
tgggattatagcagaagtcgcagcagaagtagaagcagaagcaggagctggagcaggggt
cgcagtcgtagccgcagctggtctcgtggtcgcagtcgcagctatagccgcagtattagt
ccacgtcggagtcatagtcgcagccgtagccgtggtcggagttacagccgcagccctagc
cggagtcacagccccagttatgataagcgtgataggtctgatcaacaactttctgatcag
aaggatctacatgaagctggagcttctgatccaagcatgtttaccatgtctcccggcacg
catgggaatccatttttgggaactgaaaacgtggagcagcaacctgccattgggagtaat
gatccagataatccagaggctgtagcagaccttggtcatcaatcagcttctgatatctaa
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integrated database retrieval system
