Abrus precatorius (Indian licorice): 113870986
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Entry
113870986 CDS
T07330
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113870986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113870986
03012 Translation factors [BR:
aprc03012
]
113870986
Enzymes [BR:
aprc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113870986
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113870986
Translation factors [BR:
aprc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113870986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
T2SSE
ResIII
Dicer_dimer
TsaE
PhoH
Motif
Other DBs
NCBI-GeneID:
113870986
NCBI-ProteinID:
XP_027363417
UniProt:
A0A8B8M6Q2
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MLSTLQPSSIPKTLKPSIHLPFLAMKDRPTLSSYGSIYVPPHHRLRSVADYNNSTAPVRA
KLRENPTPASTTMQSEQVPDKGHSRFVSAYDDAVSEEGSDREFEPPSLPSASPYDNTDEW
KRKFTMLLNDKSKQELISREKKDRRDFDRIAVLACRMGLHSHMYAKVVVFSKVPLPNYRY
DLDDRRPQREVILPFTTLNRVNAYFEEYLNQKSRMNRSFSDLSFARSNSSSSIGTDEGLF
EQPEPLASSRAVSEKILWQRSLEMRVQQQAWQESAEGRRMLEFRKSLAAYKRKEELLSVI
SRNQVVIISGETGCGKTTQIPQFILESEIESVQGAACNIICTQPRRISAMSVSERVASER
GEKLGESVGYKVRLEGMKGRDTHLLFCTTGILLRRLLADRQLKGVTHVIVDEIHERGMNE
DFLLIVLKDLLPHRPDLKLILMSATLEAELFSSYFNGAPIMTIPGFTYTVNTHFLENILE
MTGYKLTPYNQIDDYGLERMWKMNKQAPRKRKSQIASAVEDAIRAADFKDYSPQTQESLS
CWNPDCIGFSLIEYILCNICENEKPGAVLVFMTGWDDISSLREKLLTHAVLGDPNRVLLL
TCHGSMASSEQRLIFEEPEDGVRKIVLATNIAETSITINDVVFVLDCGKAKESSYDALNN
TPCLLPTWISKASAQQRRGRAGRVQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQ
INSLRLGSISEFLSRALQSPEILAVQNAIEYLKIIGALDENENLTILGRYLTMLPMEPKL
GKMLILGAIFNCLDPILTVVAGLSVRDPFLTPLDKKDLAEAAKSQFCGAYSDHLALVSAY
EGWKDAEIDLGGYEYCWKNFLSSQSMKAIDALRREFICLLKDIGLVDSNPASCNAWSSDV
NLIRAVICYGLYPGICSVVHNEKSFSLKTMEDGQVLLYSNSVNARETKIPYPWLLFNEKI
KVNSVFLRDSTAVSDSVLLLFGGSLMKGDADNHLKMLGGYLEFFIEPTIAEMYQSIKREL
DDFIQNKLLFPRMGIHFYHDLLSAVRLLISNDKCEGRFVFGRQVLKPSKQSMIATHPTLV
SRTESGPGGDNSKSQLQTLLTRAGYTAPVYKTKQLKNNQFRATVEFNGVQIMGQPFNNKK
SAEKDAAAEALQWLMGGKQTGREYINHMSMLLKKSKKDHN
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgctatccactttgcaaccctcgtccattcccaaaaccctaaaaccctccattcacctt
ccatttctggccatgaaggaccgccccacgctgtcctcctatggctccatctacgttccg
ccgcaccaccgtctacgctctgtcgctgactacaacaactccaccgctccggttcgcgcc
aagctccgcgaaaaccctacacccgcatctactactatgcaatcggaacaagttcccgac
aaggggcattcgcgcttcgtttctgcatatgacgacgccgtttccgaggaaggctccgat
cgtgaatttgaacctccctcactaccgagtgcttcgccctatgataacactgatgagtgg
aagcggaaatttaccatgctcttgaacgacaagagtaagcaagagttgatttcgagggag
aaaaaagataggcgtgattttgatcgaatagctgttttggcttgcagaatgggtttgcat
agccatatgtatgcgaaggttgttgtcttcagtaaggtcccacttccaaactacagatac
gatttggacgataggcggccccagagggaggtgatcttgcctttcaccacattaaaccga
gttaatgcatatttcgaggaataccttaaccaaaaatccaggatgaacagaagcttttca
gatttgtcatttgcaagatcaaacagtagcagtagtattggtacagatgaagggcttttt
gagcaacctgagccgttagcatccagtagggctgtttcagaaaaaattctctggcagaga
agcttagaaatgcgcgttcagcagcaagcttggcaggaatctgctgaaggaagaagaatg
ctagaatttcgtaaaagtcttgctgcttataaaagaaaagaagagttattatcagtcata
tcaaggaatcaggtagttatcatttcaggcgaaactggttgtggcaagacaacacaaatt
ccacaatttattttagaatctgagatagaatcagttcagggagctgcctgtaatattata
tgcacacagccaagacgcatttcagccatgtctgtttctgaaagggttgcctctgagaga
ggggaaaaattgggtgaatctgttggatataaagttcgacttgagggtatgaaagggaga
gatacccatcttctcttttgcaccacaggcatcttattaagaagattactagctgataga
cagttaaaaggtgtaactcatgttattgttgatgaaattcatgagcgtgggatgaatgaa
gattttctgcttattgtcctcaaggatctccttccccatcgaccagatctgaaactgatt
ttgatgagtgctaccctcgaagcagagctcttttcttcatacttcaatggggctccaatt
atgactattccgggcttcacatacaccgttaatactcattttttggagaacattcttgaa
atgacgggctacaaattgactccttataatcaaattgatgattatggcctagaaaggatg
tggaaaatgaacaaacaggccccaagaaagaggaaaagccaaattgcttccgccgtagag
gatgcaattagagctgctgatttcaaagattacagcccacagacacaggagtctttgtca
tgttggaatcctgactgtattggttttagtctcatagaatatattttatgcaatatatgt
gagaatgaaaagcctggtgctgttttggttttcatgactggatgggatgatataagctct
ctgagagagaagctcctgacacatgctgtcttgggcgatccaaatcgtgttttgttgctt
acatgtcatggctcaatggctagttcagagcagagattaatatttgaagagcctgaagat
ggagtaagaaaaatagtgctagcaacaaatattgctgaaacgagtatcacaataaatgat
gttgtttttgttcttgactgcggaaaggcaaaagaatcatcatacgatgcactgaataac
acaccttgtttgcttcctacatggatctctaaggcttctgctcaacaaagaagaggaaga
gctggtcgggttcaaccaggagagtgttaccatctctatcctagatgtgtttatgatgct
tttgcggagtatcagttaccagaaattcttagaacacctttgcaatctctctgtttgcaa
atcaatagtctaagacttggaagtatatctgagttcttatctagggctttgcagtctcct
gagattctcgcggtacaaaatgcaatcgaatatttaaaaataattggggctttggatgag
aatgagaatctcactattctagggcgctatctgacaatgcttcctatggaacccaaactt
ggcaagatgctaattttaggtgctattttcaattgtcttgatcccattttaactgttgtt
gctggccttagtgtgagagatccttttctaacacctttggataaaaaagatcttgcagag
gcagcaaaatcccaattttgtggtgcttacagtgatcaccttgcacttgtaagtgcatat
gaaggttggaaagatgcggaaatagaccttggtggatatgaatactgctggaagaatttt
ctttcatcccaatccatgaaagcaattgatgctcttcggagggagttcatatgcctgctt
aaggatatcggattagttgatagtaacccagccagctgcaatgcgtggagctctgatgta
aatcttatccgggcagttatttgctatggtctatatcctggaatttgttctgttgtgcat
aatgagaagtcattctctttgaaaacaatggaggatgggcaagtgctcctgtattcgaac
tcggtgaatgctcgggaaactaaaattccatatccatggctactttttaatgagaagata
aaagtgaactcagttttcctccgcgactcaacagctgtgtctgattcagtgttgcttctt
tttggtggaagcttaatgaaaggagatgctgataatcacttaaaaatgttaggaggatat
ctggagttcttcatcgagcctactattgctgaaatgtaccagagtataaagagagaactt
gatgacttcattcagaacaaactactttttccaagaatgggcatacacttctatcatgat
ctcctatctgcagtacggctgctgatttccaacgacaaatgtgaaggaagatttgtattt
ggtcgtcaggtgcttaaaccatcaaagcaatctatgatagccacacatccaaccttggtt
tcaaggactgagagtggacctgggggcgataattctaaaagtcagctccaaaccttactt
acaagagcaggatatactgcacctgtttacaagactaaacaattgaagaacaatcagttt
cgggctacagttgaattcaatggagtgcagataatgggccaaccttttaacaataagaag
agtgcagaaaaagatgctgcagccgaggcactgcaatggctgatgggtggaaagcaaaca
ggcagggagtatatcaatcacatgtcgatgttactaaagaaaagtaagaaagatcacaat
taa
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