Abrus precatorius (Indian licorice): 113871365
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Entry
113871365 CDS
T07330
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03022
Basal transcription factors
aprc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113871365
09124 Replication and repair
03420 Nucleotide excision repair
113871365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aprc03021
]
113871365
03400 DNA repair and recombination proteins [BR:
aprc03400
]
113871365
Transcription machinery [BR:
aprc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113871365
DNA repair and recombination proteins [BR:
aprc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113871365
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
113871365
NCBI-ProteinID:
XP_027364252
UniProt:
A0A8B8M8Z1
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MSSGQVVKRAKYKATVKDPGTPGVLKLTREKLAFRPNDPTSGNKLDVEFRFIKSHKHTKE
GSNKPPWLNLTHAQGSYIFELESFPDLHVCRELVGVALSKHGEATKVISEEQLSAAEMTL
RIKLLQEDSKLQKLHRELVSNGKLTESEFWATKKRLLDQDESRKSKQRIGFKNSLIFDTK
PTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFINFVPSKMNEVDFWNKYFKAEYLHSTK
NAVAAAAEAAEDEDLAVFLKDDEILEIEARKKVRRVDPTLDMEADQGDDYTHLPDHGIFR
DGSKEISEVQHPMCKRTLLQDLNRQGAVVLEGKNLDMELEHPRTVAEVLARRKQESDGVI
EEERRNRISKMTQIEDLQAQDNHPYAPLCIKDPRDYFDSQQANAVKALDDSQAGMEQIRC
SLGAEEAYGSMRASISKIKANGLRDPLFSPEVSLKVLSGLTKNISSTKSHHGKSSQESVL
DILPSTTKEKLLDHWVCSQELLRHFWSSYPVTTQNLINKTKRLKDAISQIYSKLEEIKVS
AQSDLRHQVSLVVHPMQQALNAALLHYDADNRKRNARGPKPNGYV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggggcaagtggttaagcgtgccaaatacaaagccactgtcaaagaccctggc
acccccggcgtcctcaaattgacacgagaaaagctcgctttcaggcccaatgatcctacc
tcaggcaacaagctcgatgtggagttcagatttataaagagtcataaacacactaaagag
ggatcaaacaaaccaccatggctcaaccttacccatgcgcagggaagttacatctttgag
ttagaaagttttccagatcttcatgtttgccgggaattggtgggtgttgctcttagcaag
catggagaagctacaaaagttatttctgaggaacagctgagtgctgctgaaatgacactc
agaattaagctattgcaagaagatagcaagttgcagaagcttcatagggaacttgtgtct
aatggtaagcttacagaatcagaattttgggctacaaaaaagagattgctagatcaagat
gaaagcagaaagtcaaaacaacggattggttttaaaaattctttgatcttcgacacaaag
cctacgagtgatggacggataaaccaggttaaatttcaattgacaccagagataaaatat
cagatttttgccctcaaacctgctgtccaccaggcatttatcaattttgtacctagtaag
atgaatgaggtggatttctggaataaatacttcaaagctgagtatctccatagtaccaaa
aatgctgttgcagcagctgctgaggctgctgaagatgaggatcttgctgtttttttgaaa
gatgatgagatattagaaattgaagctcgaaagaaggttcgacgggttgatccaacatta
gacatggaagcagaccaaggagacgattacactcatcttcctgatcatgggatcttccgt
gatggtagcaaggaaatatctgaagtacaacatcctatgtgtaagagaacattgttgcaa
gatcttaacagacaaggtgcagttgttcttgaaggaaaaaatttagatatggagttggaa
cacccaagaacagtagcagaagttcttgctcgaagaaaacaggaatctgatggggttata
gaggaggagcgacgaaacagaatttctaagatgacccagattgaggatcttcaggcacaa
gataatcatccatatgcaccactctgtatcaaggatccccgtgactattttgattcccag
caagctaatgccgtaaaggctttggatgattcccaagctggaatggagcaaatacgatgc
agtttgggtgctgaggaagcctatggctctatgagagcatctatatctaagatcaaagct
aatggattaagggatcctctatttagtcctgaggtttctcttaaggttcttagtggattg
accaaaaatatctcaagcaccaaatcccatcatgggaaaagttctcaggagagtgtcctt
gatatattgcccagtacaactaaggagaaactactagatcattgggtatgcagtcaagaa
ctgctgaggcacttttggtcttcatatccagttacaacacaaaaccttattaataagaca
aaaagactgaaagatgccatatcacaaatatattctaaacttgaggaaataaaggtatct
gcacagtcagacctgcggcaccaagtttcccttgttgtccatcctatgcagcaggctctg
aatgctgccttattacattatgatgctgacaataggaaaagaaatgcaagaggaccaaag
cctaatggttatgtctag
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