Abrus precatorius (Indian licorice): 113872040
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Entry
113872040 CDS
T07330
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X1
KO
K14962
COMPASS component SWD2
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113872040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113872040
03036 Chromosome and associated proteins [BR:
aprc03036
]
113872040
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113872040
Chromosome and associated proteins [BR:
aprc03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
113872040
COMPASS/SET1 complex (yeast)
113872040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
KNTC1_N
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
PQQ_2
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
113872040
NCBI-ProteinID:
XP_027365025
UniProt:
A0A8B8M8L0
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
MGGTQVEREEKVSLELSEEILQSMEVGMAFKDYNGRISSLDFHRASSYLVTASDDESIRL
YDVTGGTCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
HDRVVSLSLCSRKECFISGSVDRTVLLWDQRAEKCQGLLRVQGRPAISYDDQGLVFAIAF
GGYMRMFDARKYEKGPFEIFSVGGDISDANVVKFSNDGRLMLLTTADGHIHILDSFRGTL
LSTYNVPPVSCNSTLEASFSPEGMFVISGSGDGSIYAWSVRSGKEVASWRSATSDTGPPV
IKWAPGSLMFATGSSELSFWIPDLSKLGAYVGRK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggacacaagtggagagagaagagaaggtttctttggagctgagtgaagaaatt
cttcagagtatggaagtagggatggcctttaaggactataatggtagaattagttcgttg
gattttcacagggcatccagttatttagtgactgctagtgatgatgaatccattcgtttg
tatgatgttactggtggaacatgtttgaagacaattaacagcaagaagtatggggttgac
ctggtttgcttcacgtctcatcctacaactgtcatctactcttcaaaaaatggttgggat
gaatctttgcgccttctatcattgcatgataacaagtatttgagatatttcaaaggtcac
catgacagggttgtatcacttagcttgtgctctcggaaagaatgctttatatctggatct
gtagatcgaactgtcttactatgggatcaaagggctgagaagtgccagggacttttgcgt
gtacaaggaaggcctgctatatcatatgatgatcaggggcttgtctttgcaattgccttc
ggaggatacatgagaatgtttgatgctcgcaagtatgaaaagggtccatttgagatattt
tctgttgggggagatatttctgatgcaaatgttgtgaaatttagtaatgacgggcgactc
atgctgttgacaactgcagatggacacattcacatactagactcatttcgtggcacactt
ttatccacatataatgtcccacctgtctcatgcaactccacattagaagcttctttcagc
cctgagggaatgtttgtaatatcaggttctggggatggcagcatctatgcatggagtgtt
cgaagtggcaaagaagttgcaagttggaggagtgcaacttctgatactggacctcccgtt
ataaagtgggctcctggaagtcttatgtttgctactggatcttctgagctgtcattctgg
attccagatttgtctaaattgggagcttatgttggaagaaagtag
DBGET
integrated database retrieval system
