KEGG   Abrus precatorius (Indian licorice): 113872605
Entry
113872605         CDS       T07330                                 
Name
(RefSeq) pre-mRNA-processing factor 19-like
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
aprc  Abrus precatorius (Indian licorice)
Pathway
aprc03040  Spliceosome
aprc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aprc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113872605
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113872605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aprc03041]
    113872605
   04121 Ubiquitin system [BR:aprc04121]
    113872605
   03400 DNA repair and recombination proteins [BR:aprc03400]
    113872605
Enzymes [BR:aprc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     113872605
Spliceosome [BR:aprc03041]
 Complex B
  Other components
   Prp19 complex
    113872605
 Complex C
   Prp19-CDC5 complex
    113872605
Ubiquitin system [BR:aprc04121]
 Ubiquitin ligases (E3)
  U-box type E3
   113872605
DNA repair and recombination proteins [BR:aprc03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    113872605
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Prp19 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 EIF3I ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_WDR75_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_NWD2_C Ge1_WD40 WD40_like Beta-prop_DCAF4 WDR54 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 113872605
NCBI-ProteinID: XP_027366094
UniProt: A0A8B8MFY2
LinkDB
Position
Unknown
AA seq 461 aa
MLGMIQNEWDALMLSNFALEQQLHIARQELSHALYQYDAACRVITRLKKERDEARSLLAQ
ENSNFTVSAPSAVTVNASVASNGKRAAEDEELAPHGKKIHSGITSAVISELTDCGKALHQ
RRRRRQIPDTLAPVDAIDGYTQISSHPIHKTSKPGIKCLDVLYSKDIIASGGIDTNAVIF
DRPSGQILSTLSGHSKEVTSVKFVAQGGLFLTGSADKTVRLWQASDEGTYNCRDILRDHT
AEVQAITVHATNDYFVTASLDSTWCFYELSSGTCLTRYVCVVFDNSGSCGGYTSAAFHPD
GLLLGTGSSDGIVKIWDVTSQSSIAMFEDHVGPVTAISFSENGYVLATTTQDGVKLWDLR
KGKNFGNFAPYDSETLTNSVEFDHSGSYLATAGSDLRIYRATNVKSEWNCIKTFPDLSGT
GKVNCVKFGPDAKYIAVGSMDRNLRIFGPPNEGGPVNHEVP
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgcttggaatgatccaaaatgaatgggatgcactaatgctatctaattttgctttggag
caacaattgcacatcgcaaggcaagagctaagtcatgctctctatcagtatgacgctgca
tgccgagtgataacaagactgaaaaaagaacgagatgaagctagatcattgcttgcacaa
gaaaatagtaacttcaccgtttctgcccccagtgcagtaacagtaaatgcttctgtcgcg
agcaatgggaaaagagctgctgaggatgaggaactagcgcctcatggaaagaaaatacat
tctggaataacttctgccgtaatttccgagctaactgactgtggtaaagctctccaccaa
cggaggagaaggcggcagattcctgacactttggcccctgttgatgctatagacggatat
acccaaatatctagtcatcccattcacaaaacaagcaagccgggcattaaatgtcttgac
gttctttattctaaggacataattgcctctggagggattgatacaaatgctgttattttt
gaccgaccatcaggacagatattatccacactcagtggtcactcaaaagaggttacaagt
gtaaagtttgtagctcagggtggtttgtttttaactggttcagccgataagacagttcgt
ttgtggcaagcgtcggatgaaggtacctataactgcagggacatcttgagggatcataca
gctgaggtgcaagccatcactgtccatgctaccaatgattactttgtaactgcttcgctt
gacagcacttggtgcttttatgaactttcttctggaacatgtctaactcggtatgtatgt
gttgttttcgataattcaggttcttgtggaggctatacatctgcagcttttcatcccgat
ggtctccttcttggaactggcagctcagatggtattgttaagatctgggatgtaacaagt
cagtcaagtattgctatgtttgaagatcatgtagggccagtgaccgccatatccttttct
gagaatggctacgtccttgcgacgacaactcaagatggtgtaaagctttgggatctacgt
aaagggaagaacttcggcaattttgctccatatgactcagaaacactaacaaactcagtg
gagttcgaccatagtggatcttaccttgcaactgcaggctctgatttaaggatttaccga
gctacaaatgtgaaatctgaatggaattgtatcaaaacttttcctgatttatctggaaca
gggaaagtcaactgtgttaaatttggtccagatgcaaaatacattgcagtgggatcaatg
gaccggaatcttcgaatatttggcccaccaaatgaaggtggaccagtgaatcacgaggtg
ccttga

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