Abrus precatorius (Indian licorice): 113872997
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Entry
113872997 CDS
T07330
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-I
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113872997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aprc03021
]
113872997
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113872997
Transcription machinery [BR:
aprc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113872997
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113872997
U7-dependent histone pre-mRNA processing factors
113872997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
113872997
NCBI-ProteinID:
XP_027366729
UniProt:
A0A8B8MHN4
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MGSSAKRRESVSTREEDQLIVTPLGAGNEVGRSCVYMSYKGKTILFDCGIHPAYSGMAAL
PYFDEIDPSTVDVLLVTHFHLDHAASLPYFLEKTTFRGRVFMTYPTKAIYKLLLSDFVKV
SKVSVEDMLYDEQDINRSMDKIEVIDFHQTVEVNGIRFWCYTAGHVLGAAMFMVDIAGVR
VLYTGDYSREEDRHLRAAETPQFSPDVCIIESTYGVQHHQPRHTREKRFIDVIHSTISQG
GRVLIPAFALGRAQELLLILDEYWANHPELQNIPIYYASPLAKKCLTVYETYTLSMNDRI
QNAKSNPFSFKYISALNSIEIFKDIGPSVVMASPSGLQSGLSRQLFDMWCSDKRNACIIP
GYVVEGTLAKTIINEPKEVTLMNGLTAPLNMQVHYISFSAHADSAQTSAFLEELNPPNII
LVHGEANEMGRLKQKLMSQFADRNTKILTPKNCQSVEMYFNSQKMAKTIGKLAEKTPEVG
ETVSGLLVKKGFTYQIMAPDDLHVFSQLSTASITQRITIPYSGAFSVIRHRLKQIYESVE
QSVDEESGVPTLQVHERVTVKHESEKHISLHWTSDPISDMVSDSIVALILNINRDVPKIM
AESDAIKIEEENEKKAEKVMHALLVSLFGDVKVGENGKLIINIDGNVAELNKDSGEVESE
NEGLKERVRTAFRRIQSSVKPIPLSAP
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttcggcgaagagacgcgagagcgtgagcaccagagaggaagatcaactgata
gtgacgccattaggcgccggaaacgaagttggtcgttcatgcgtgtacatgtcgtacaaa
ggcaaaacgatattgttcgattgcggaattcaccctgcttattcaggcatggctgcgtta
ccctacttcgacgaaattgacccttcgaccgtggacgttcttctcgtcactcactttcac
ttggatcatgccgcctccttgccctattttcttgagaaaaccacgttcagaggaagagtc
ttcatgacttaccctaccaaggccatttacaagctcctcctgtctgattttgtcaaagtc
agcaaggtttctgtggaagatatgctctatgatgaacaggacatcaaccgctccatggat
aaaattgaggttattgatttccatcaaacagttgaagtgaacggtattcgattctggtgc
tatactgcaggccatgtccttggtgctgctatgttcatggttgacattgcaggtgtacga
gtgctttacactggagactattcgcgtgaggaagaccggcatctccgtgctgctgagacc
ccacagttctcccccgacgtatgcatcatagaatccacctatggtgtacagcaccatcag
cctcgacacacacgagaaaaacgtttcattgatgttatacactcaaccatttctcaaggg
ggtcgtgtcttgattccagcatttgccctaggtcgtgcacaggagctcctccttatcctt
gatgaatattgggcaaatcatcctgaactccagaatatacccatctattatgcttctcct
cttgcaaaaaaatgtttgaccgtgtatgaaacatacaccctttccatgaatgacaggatc
cagaatgccaagtcgaatcccttttcctttaagtacatatcagcattaaacagcattgaa
attttcaaagatataggaccttctgtggtgatggctagccctagtggacttcagagtggc
ttgtcgcggcaattatttgatatgtggtgctctgataaaagaaatgcttgtattatacca
ggatatgttgttgaagggactctggcaaaaaccatcatcaatgaacccaaggaagttact
ctcatgaatggactcactgcacctcttaacatgcaggtgcactacatttccttttctgct
catgctgactctgctcaaacaagtgcattcttagaagagctcaatcctcccaacataatc
cttgttcatggggaagctaatgagatgggtaggctgaaacagaagctcatgagtcaattt
gccgatcgcaatactaaaatccttactccaaaaaactgtcagtctgttgaaatgtatttc
aattcgcagaaaatggcaaaaaccattgggaagcttgctgaaaaaacaccagaagttggt
gaaactgtcagtggtttgctagttaagaaaggcttcacatatcagataatggcaccggat
gatctccatgtcttctcacaactatccacagcaagcatcactcagagaattaccatccct
tattcaggtgctttcagtgtcatacgccatagactcaaacagatatatgagagtgtagag
cagtcagtggatgaagaatctggagttccaacattgcaagtgcatgagcgtgtgacagtg
aagcatgagtctgaaaagcatatctccttgcattggacatcagaccccattagtgacatg
gtatcagattcaattgttgctctgattttaaacataaaccgtgatgtcccaaaaataatg
gctgaatcggatgccattaaaattgaggaagagaatgagaagaaggcagagaaggttatg
catgccctcctcgtttcactctttggagatgtaaaggtaggcgaaaacgggaaattgata
attaacattgatgggaatgtagcagagctcaacaaagacagcggggaggtggagagcgaa
aatgaaggcctcaaggaaagagtaagaacagccttccggcgcattcaaagttctgtgaag
ccgattcctctttctgcaccatag
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