Candidatus Absconditicoccus praedator: HLG78_00230
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Entry
HLG78_00230 CDS
T07729
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aprd
Candidatus Absconditicoccus praedator
Pathway
aprd03030
DNA replication
aprd03430
Mismatch repair
aprd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aprd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HLG78_00230 (holA)
03430 Mismatch repair
HLG78_00230 (holA)
03440 Homologous recombination
HLG78_00230 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aprd03032
]
HLG78_00230 (holA)
03400 DNA repair and recombination proteins [BR:
aprd03400
]
HLG78_00230 (holA)
Enzymes [BR:
aprd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HLG78_00230 (holA)
DNA replication proteins [BR:
aprd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HLG78_00230 (holA)
DNA repair and recombination proteins [BR:
aprd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HLG78_00230 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
P4Ha_N
Motif
Other DBs
NCBI-ProteinID:
UFX82565
LinkDB
All DBs
Position
complement(42824..43810)
Genome browser
AA seq
328 aa
AA seq
DB search
MKKNIQLFTGDESYFLNKEIDKRKQGFANKHGKENIFQFKSDEFDSDEIINTIFSGGLFS
QKKLVFIYGVPKDSFGSNKITSKKISDFEEVFQNKFYEIDDDVFVVFVSLQPDKRTKFYK
FLKNNISIKSFNKMKEKDVVNFIKDNYMDVFESEKEIIEFVEIVGVDMYMIENEIKKLKS
YVKNNNKKIDSMLIREICFAGGHINSFLILDHLFSDKNKALNLLEKSQKDGADSMQILGM
LAWSARVSIYIIDYYNNVSSSSKDIASSLSLHPFVVSKTLKHIQKLSKNYQSIKTFFHSI
VILDKTIKNGNISQDLIWLNLKKIITKI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatattcaactttttacatgagatgaatcctattttcttaataaagaaata
gataaacgaaaacaatgatttgctaataaacatggaaaagaaaatatttttcaatttaaa
tctgatgagtttgattctgatgaaataattaatacaatattttcttgatgattgttttct
caaaaaaaacttgtttttatatatggtgttccaaaagattcttttggttcaaacaaaata
acttcaaaaaaaatttcagactttgaggaagtatttcaaaataagttttatgaaattgat
gatgatgtttttgtagtttttgtaagtttacagcctgataaaagaacaaagttttataaa
tttttgaaaaacaacatttctataaaatcttttaataaaatgaaagaaaaagatgtagta
aattttatcaaagataattatatggatgtttttgagtctgaaaaagaaattatagaattt
gttgaaatagtatgagttgatatgtacatgatagaaaacgaaataaaaaaactaaaaagt
tatgtaaaaaataacaataaaaaaatagattctatgctaattcgtgaaatttgttttgct
ggatgacatataaattcttttttgattttggatcaccttttttctgataaaaataaagca
ttaaacttactagaaaaatctcaaaaagattgagctgattctatgcagattttgtgaatg
ctagcttggtctgcaagagttagtatatatattattgattattataacaatgtatctagc
tcttctaaagatattgcttcttcattgtctttacatccttttgttgtttcaaaaacacta
aaacacattcaaaaactttccaaaaattatcaatcaataaaaactttttttcatagtata
gttattttggataaaactataaagaactgaaatatttcacaagatttaatctggctgaat
ttaaaaaaaataatcactaaaatttaa
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