Candidatus Absconditicoccus praedator: HLG78_00365
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Entry
HLG78_00365 CDS
T07729
Name
(GenBank) DNA topoisomerase 4 subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
aprd
Candidatus Absconditicoccus praedator
Brite
KEGG Orthology (KO) [BR:
aprd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aprd03032
]
HLG78_00365
03400 DNA repair and recombination proteins [BR:
aprd03400
]
HLG78_00365
Enzymes [BR:
aprd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HLG78_00365
DNA replication proteins [BR:
aprd03032
]
Prokaryotic type
DNA Topoisomerases
HLG78_00365
DNA repair and recombination proteins [BR:
aprd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HLG78_00365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
UFX82592
LinkDB
All DBs
Position
69557..71938
Genome browser
AA seq
793 aa
AA seq
DB search
MKEKNQEKIISKSIEEEITQSYIDYSMSVIVSRALPDVRDGLKPVLRRILFSMYGLKLFH
NSSFKKSAAVVGEVLGKYHPHGDSSVYEALVRLTQDFSLRYPLVEGQGNFGSIDGDGAAA
MRYTEARLTKLAEEMLQDIQMQTVDWRDNYDNSKQEPVVLPTKFPNHLCNGTMGIAVGMA
TNMAPHNLTEVIDACLLLLENKEATFDEIMNIIKGPDFPTGGIIYDSENIKNVYQKGKGG
IPVRGKVSTEEDNGKEKIVISQLPYQVNKSTLVSKIGELVSTKKIEGVDDITDESNKSNI
RIVITLKKGTDKDSVLTLLYKYTDLQTNFNINNVALIDKGIQPQLLNIKDLLLHFIDFRR
EVIYNRSVFQLNKAEDRLHILLGLEKAIDILDDVIETIRGSQTRQEAKDALIKNFEFSEP
QAEYILMLRLQTLVGLEIQKIIDEKKEKEELIEYLREVINNPEKLDEVVIDELIYIKDEY
GDDRRTEVSESLEVYQLDDSVKNLKRLEELQKEKVILWMGDDFETKILYQTRLNIIPENT
FEIKHIHNQYKIFAISKTGELVIKRIKDFGGHNIKGNGIDFKKDFNLNEDIVFSDIIDED
FDYLVLLTDKNNIKKVSKELIDKLKKTPTKIMGLGNGESIIKIQKIKENDNVGILSQEGM
ILMFQESNIRPSGKTAGGVKAIDLDEGEKVANMFTNRGEPFIFIHTNKGGKLISMEDMKI
QKRGQAGLVATKLDSNEKLLGGISIDEGAVMMKLSNGKMVEIHSNDIPLKDRNTKPGKIT
EKEILSAFKPWRE
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaaaatcaagaaaaaataattagtaaaagtattgaagaagaaattacgcaa
tcttatattgattatagtatgtctgtaattgtttctagagctcttccagatgttagagat
tgactcaaacctgttttgagaagaatattattttctatgtactgattaaaattatttcac
aactcaagttttaaaaaatctgctgctgtagtgtgagaagtattatgaaaatatcatcct
catggtgatagcagtgtgtacgaagcattagtaagacttactcaagatttttcactaaga
tatcctttggtagaatgacaatgaaatttttgaagtatagatggtgatggagcagctgct
atgaggtatactgaagcaagattaaccaaacttgcagaagaaatgcttcaagatattcaa
atgcaaacagttgattggagagacaactatgacaactccaaacaagaaccagtagtttta
ccaacaaaatttccaaaccacctttgtaatggaactatgtgaattgctgtatgaatggct
acaaacatggctccacacaatcttacagaagttattgatgcttgtcttttattgcttgaa
aacaaagaagcaacttttgacgagattatgaatatcataaaatgacctgattttcctaca
tgatgaataatatatgattcagaaaatattaaaaatgtatatcaaaaatgaaaatgatga
attccagttcgttgaaaagtctcaacagaagaagacaattgaaaagaaaagatagtaatc
tcccaactaccctatcaggtaaacaaatcaactcttgtaagtaaaatatgagaacttgtt
tctaccaaaaaaattgaatgagtggatgatataactgatgaatccaacaaatccaatata
agaattgttattactttgaaaaaatgaacagataaagatagtgtacttactttgttgtat
aagtatactgatctacaaaccaactttaatataaacaatgtagcattaatagataaatga
atacaaccacaactactaaatatcaaagacttattattgcattttatagattttagaaga
gaagttatttataacaggtctgtattccaattgaataaagcagaagatagacttcatata
cttttgtgattggaaaaagcaatcgatatacttgatgatgtgatagaaacaattagatga
tctcaaacaagacaagaagcaaaagatgcattgataaaaaactttgagttttctgaacct
caagctgagtatatacttatgttgagactacaaactcttgtatgattggaaatccaaaaa
attattgatgagaaaaaagaaaaagaagaattgattgaatacctaagagaagtaattaat
aatccagaaaaattggatgaagtagtaatagatgaattgatatacatcaaagatgagtac
tgagacgacagaaggacagaagtttctgaaagcttggaagtttatcaacttgatgatagt
gtaaaaaatctaaaaagacttgaagagcttcaaaaagaaaaagttattctatggatgtga
gatgattttgaaactaagatactttatcaaacaagattaaatataataccagaaaatact
tttgaaatcaaacatattcacaaccaatacaaaatttttgctataagtaaaacttgagag
cttgtaataaaaagaataaaagattttggatgacataacattaaatgaaattgaatagac
ttcaaaaaagacttcaatctcaatgaagatatagtattttctgatataatagatgaggat
tttgattatcttgtgcttcttacagataaaaacaacatcaaaaaagtaagcaaagaactt
attgataaactcaaaaaaactcctaccaagataatgtgactttgaaattgagaaagcata
ataaaaattcaaaaaataaaagaaaacgacaatgtatgaatactttctcaagagtgaatg
atattgatgttccaagagtcaaatattagacctagctgaaaaactgcaggatgagtaaaa
gcaatagacctggacgaatgagaaaaagtagcaaatatgtttactaatagatgagagcct
ttcatatttatccatacaaataaatgagggaaactaataagcatggaagatatgaaaata
caaaaaagatgacaagcatgacttgtagccacaaaacttgatagtaatgaaaagcttttg
ggtggtatatctattgatgaatgagcagttatgatgaaattgagtaactgaaaaatggtt
gaaattcactcaaatgacatacctttgaaagatagaaataccaaaccttgaaaaatcacc
gaaaaagaaatactttctgccttcaaaccatggagagagtaa
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