Candidatus Absconditicoccus praedator: HLG78_01290
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Entry
HLG78_01290 CDS
T07729
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
aprd
Candidatus Absconditicoccus praedator
Pathway
aprd03030
DNA replication
aprd03430
Mismatch repair
aprd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aprd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HLG78_01290 (dnaX)
03430 Mismatch repair
HLG78_01290 (dnaX)
03440 Homologous recombination
HLG78_01290 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aprd03032
]
HLG78_01290 (dnaX)
03400 DNA repair and recombination proteins [BR:
aprd03400
]
HLG78_01290 (dnaX)
Enzymes [BR:
aprd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HLG78_01290 (dnaX)
DNA replication proteins [BR:
aprd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HLG78_01290 (dnaX)
DNA repair and recombination proteins [BR:
aprd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HLG78_01290 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RCF1-5-like_lid
AAA_22
AAA_5
RuvB_N
DNA_pol3_gamma3
AAA_14
AAA_assoc_2
DUF815
AAA_18
Rep_fac_C
AAA_19
AAA_16
AAA_30
ResIII
AAA_lid_11
AAA_lid_RFC1
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
UFX82769
LinkDB
All DBs
Position
complement(286326..287759)
Genome browser
AA seq
477 aa
AA seq
DB search
MSLYLKYRPISFDDVVEQDHIRDILKSQVKNSECSNNYLFFGSRGTGKTSIARILGKAVN
CLESSDGNPCGKCDNCQTIAEGKNLDFVEIDAASHTQVDNIREEILEKALYTPTKLSKKV
YIIDEVHMLSKAAFNALLKIMEEPPSYLFFILATTEINKVPDTIVSRSQVFNFKRLSVEY
IAQRLEYICDNESINYQKQALKSIANMSDGAMRDAIKYLEQVASLGDVIEENVSVFLGVL
DESRLEEFIKIVRKGDFDKVIEFIDNLKNSGIDMYNFVNQLLQHVDKKFMEDPKFYSYFS
EAVGETMTALKTYPVSDLVLKTKVYRIINELGFSAQKKESISEDESNNFSDGNIDSGPDK
PNLNVEGKEKESSFDTKNSEKVEDSKIEIDFQDVFGKVLENVDKTAIKTILKRYMDVKSY
ESGVLNLVVINKMQYNIVSKVENKQYLEKIFAKFMDDGFSGIRIHYQSKEDYLNEKL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtacttgaaatatcgtcctattagttttgatgatgtagtagaacaagatcat
attagagatattttgaaatctcaagtaaaaaacagtgaatgctcgaacaattatttgttt
tttggatcaagatgaacatgaaaaacttcaatagcaagaattttgtgaaaggcagtaaac
tgtttggagtcatctgatggtaatccatgctgaaaatgtgacaactgccaaactattgct
gaaggcaaaaacttggattttgtagaaatagatgctgcatctcacactcaagttgataat
attagagaagaaatactagaaaaagctttgtatactccaaccaaactttcaaagaaagta
tatattatagatgaagtacatatgctatccaaggccgcattcaatgcattattaaaaata
atggaggagccaccatcttatcttttttttatattagcaactacagaaattaataaagta
ccagacacgatcgtgtctagatcacaggtttttaatttcaagagactttcagtagagtat
atagctcaaagacttgaatatatttgtgataatgagagtataaactatcaaaaacaagca
ttaaaaagtatagcaaatatgtctgattgagcaatgagagatgctataaaatatctggaa
caggtagcctctttgtgagatgtgattgaagaaaatgtatctgtttttttgtgagttttg
gatgaaagtaggttagaagaatttataaaaattgttagaaagtgagattttgataaggtg
attgagtttatagataatcttaaaaattcttgaatagatatgtataattttgtaaatcaa
cttttgcagcatgtagacaagaaatttatggaagatccaaagttttattcatatttttct
gaagcagttggagaaacaatgactgcattgaaaacatatcctgtatcggatcttgttctg
aaaacaaaggtttatagaattatcaatgagttatgattttctgctcaaaaaaaagagtct
atctcagaagatgaatcaaataatttttcagattgaaatatagatagctgacctgacaag
cctaatcttaatgttgaatgaaaagaaaaagaaagcagctttgatactaaaaattcagaa
aaagtagaagattccaaaatagaaatagattttcaagatgttttttgaaaagttttagaa
aatgtagataaaaccgcaattaaaactatcctaaaaaggtatatggatgtgaagtcttat
gaaagttgagtactaaatttggttgtaataaacaaaatgcagtataatattgttagtaag
gttgaaaataaacaatatttagaaaaaatatttgcaaaatttatggatgatggattttct
ggaattcgtatacattatcagtcaaaagaagactatctgaatgaaaaattataa
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