Candidatus Absconditicoccus praedator: HLG78_02810
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Entry
HLG78_02810 CDS
T07729
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
aprd
Candidatus Absconditicoccus praedator
Pathway
aprd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aprd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HLG78_02810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aprd03400
]
HLG78_02810
Enzymes [BR:
aprd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
HLG78_02810
DNA repair and recombination proteins [BR:
aprd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HLG78_02810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UFX83043
LinkDB
All DBs
Position
complement(574675..575643)
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AA seq
322 aa
AA seq
DB search
MFSIGAHTSIAGGIQNSIPRSHSIGADALQIFAKSPRGWFYSNDKITDDIVQKCQQSFSE
TNHKYGMIHSVYLINLAKAPKDAAKDVDSVIDDFKIADRIGFSSVNVHLGKYSDMTKQQT
FQNMAENLAKILEATKDYDVDFLFENTSGQGTEVGYRFDELAEFYDFLKKFFGQEYVEQK
VKFCFDTAHGWGAGYDLNDFGQVMDEFDKFLGKDNLYCFHLNDSKAICGSRLDRHASLGR
GFVGLNALFQVVDWAYDNNKPIILETPDPDLRSEEIQMIRKYISGEFSGKEILDFNNKYF
MTEYLKKFEKYITNQYERGFFG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgttttctatatgagctcatacaagtatagcaggtggaatacaaaatagtatcccaagg
tctcatagtatatgagcagatgctttgcaaatatttgcaaagtctccaagatgatggttt
tactccaatgataaaattacagatgatatagtgcaaaaatgccaacaaagcttttcagaa
acaaatcataaatactgaatgatacatagtgtatatctaataaatcttgcgaaagctcca
aaagatgctgcaaaagatgtagattcagtaattgatgatttcaaaattgctgatagaatt
ggtttttctagtgtaaatgtacatcttggtaaatattctgatatgacaaaacagcaaact
ttccaaaatatggcagaaaatttggcaaaaatactagaagccaccaaagattatgatgta
gattttttgtttgaaaatacttctggtcaatgaactgaggtatgatatcgttttgatgag
ttggcagaattttatgattttttgaaaaagtttttttgacaggagtatgtagagcagaaa
gttaaattttgttttgatacagctcatggttggtgagcttgatacgatctaaatgatttt
tgacaagttatggatgagtttgataaatttttgtgaaaagacaatttgtattgttttcat
ctaaatgatagtaaagctatatgtggaagtagattggatagacatgcaagtttgtgaaga
tgatttgtatgattgaatgctttgttccaggtggttgattgggcttatgacaacaacaag
ccaatcatacttgaaactcctgacccagatttgcggagtgaagaaatacaaatgatcaga
aaatatatttcttgagaattttcagggaaagaaattttggattttaacaataagtatttt
atgacagaatacttgaaaaaatttgaaaagtatataacaaatcaatacgaaagaggtttt
ttcggataa
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