Candidatus Absconditicoccus praedator: HLG78_03360
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Entry
HLG78_03360 CDS
T07729
Name
(GenBank) S1 RNA-binding domain-containing protein
KO
K02945
small subunit ribosomal protein S1
Organism
aprd
Candidatus Absconditicoccus praedator
Pathway
aprd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
aprd00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HLG78_03360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
aprd03011
]
HLG78_03360
Ribosome [BR:
aprd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HLG78_03360
Bacteria
HLG78_03360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
CvfB_2nd
Spt6_S1
SH3_2
Cas_Cas2CT1978
Motif
Other DBs
NCBI-ProteinID:
UFX83146
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All DBs
Position
complement(684884..686065)
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AA seq
393 aa
AA seq
DB search
MDLQNFLNGVQNETVTVPKIKEGKKTKGTVIKKIEKGVLVSCQDDTFTGLILPKEAKDLE
RNGVDLSPGTELEAEIINLDTMDDEGYFVISISKLIQYDVWNSILEKTKKDETITVVPSE
ANLGGLLVDMHGIKGFIPLSQLAPVNYPRVEDGDQEKIFEQLLDLMGKEFQVRIINIDED
GKRLILSEREALREEKDKIMQDLDIGKEYEGTISGVSSYGLFVTIGGGIEGLVHVSEITY
GHVDNIERFGNIGDKVNVKVIGYEDGKISLSMKKLKGDPWKIIPQKFQIGDIVEGEVIRF
VPYGVFIRVYDDINGLIHLSEITGKAVSNPAEIVKPGQKVKAKIILMDPDKRKMGLSMKA
LEEEKEGKSRSSKSTSAKEQKSEKVVVKKKKDQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggatttacaaaattttttgaactgagttcaaaatgagactgtaacagtcccaaaaatt
aaagagtgaaaaaaaacaaagggtactgtaatcaaaaaaattgaaaaatgagttttagtt
agttgtcaggatgatacattcacttgacttatacttcctaaagaagcaaaagacttggaa
agaaatggagttgatctttctccaggtacggagcttgaagcagaaattataaatcttgat
actatggatgatgagtgatattttgtgatatcaatatcaaaattaatacagtatgatgtt
tggaattcaatcttggaaaaaacaaaaaaagatgaaacaattactgttgttccgtcagaa
gcaaatctttgaggtttgttggtagatatgcactgaataaaatgatttattcctttatct
caacttgctccagtaaattatccaagagtagaagatggtgatcaagaaaaaatctttgag
cagttgttggatttgatgggtaaagaattccaggtaagaattataaatattgatgaggat
tgaaaaaggcttatcttatcagaaagagaagcattaagagaagaaaaagataaaataatg
caagatcttgatatttgaaaagagtatgaatgaacaatatcaggggtatcaagttattga
ttatttgttactatatgaggttgaatagaatgattggtgcatgtttctgaaataacatac
tgacacgttgataatattgaaagatttggtaatataggagataaagtaaatgtaaaagtg
atttgatatgaagactgaaaaatatcattatcaatgaaaaaactaaaaggtgatccatgg
aaaattatacctcaaaaattccaaatatgagatattgttgaaggtgaagtaataagattt
gtaccttatggtgtttttattagagtgtatgatgatataaactgattgatacacctaagt
gaaataacatgaaaagcagtttcaaatcctgctgaaattgtgaaaccatgacaaaaagta
aaagcaaaaattatactaatggatccagataaaagaaaaatgtgacttagtatgaaagca
ttagaagaagaaaaagaatgaaaatcaagatcttctaaatcaacctcagcaaaagaacaa
aagtctgaaaaagttgtagttaaaaagaagaaagatcagtaa
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