Candidatus Absconditicoccus praedator: HLG78_04040
Help
Entry
HLG78_04040 CDS
T07729
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
aprd
Candidatus Absconditicoccus praedator
Pathway
aprd02024
Quorum sensing
aprd03060
Protein export
aprd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
aprd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HLG78_04040 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HLG78_04040 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HLG78_04040 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
aprd02044
]
HLG78_04040 (secD)
Secretion system [BR:
aprd02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HLG78_04040 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD_SecF_C
SecD_1st
MMPL
DUF5693
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
UFX83273
LinkDB
All DBs
Position
816724..818343
Genome browser
AA seq
539 aa
AA seq
DB search
MFSIFFIGYEFDEASGEDEMKITSNGIAHFKKGLDVAGGVRLTYRIDYSRYEQIYQDEQR
LEEVKSNVESIILQNIDDRISALGVSDYSSYIQSIGEEDYVVVEIGGVQDIDAAKDIIGK
TVELEFKVPFEDEDRDDETKDSRQLLSEEFLTQLVNEESSFEEIYQENQDNGVRLNTHQG
DDIDEFPSYIQENYDELVEGGQGHILPSLVEDEEEESWYILGFEGQQEGNYSFLALEVDY
YPQWHAARDPESGQILNAAFFNYASVDSSETGRPVVLVRFNSEGGQIFCNLTNQHVGEQM
AIFVGGQLRTAPVIRESICGGTAQIDGDFDSQGARELADSLNEGAMPAPLLLSQEEMVSP
TLGENALNAALIAAGVGFFLIFIFMIFFYGWKMGLVSLITLLFFLTILFGLVKVLGYALS
LSGIAAVILSIGIAVDANVLIFERVREEMKSGKGKILSIHDGFARSISAIRDGNLTTGLI
GLLLFMIGTNVFRGFGTMMIVNIALILAVVVPLTKLLLLLIYDYTEEDSTEEATSVVQA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ttgttttctatattttttataggatatgagtttgatgaagcttcatgagaagatgaaatg
aaaataacttccaattgaatagctcattttaaaaagtgacttgatgttgcttgatgagtt
agacttacttatagaatagattattcaagatatgagcagatatatcaggatgagcaaaga
cttgaagaagtaaaaagtaatgtagagtctataattttgcaaaatatagatgataggata
tctgctttgggagttagtgattattcaagttatattcaatctatttgagaagaggattat
gtggtcgtagaaataggatgagttcaagatatagatgcagcaaaagatataatatgaaaa
acagtagagttagagtttaaagtgccttttgaagatgaagatagagatgatgaaaccaaa
gattcaagacaattgttatctgaagaatttctaactcagctggttaatgaagaaagtagc
tttgaagaaatatatcaagaaaatcaagacaattgagtgaggttgaatacacatcaatga
gatgatatagatgaatttccttcatatattcaagaaaattatgatgaacttgtagagtga
tgacaatgacatattcttccttcattagtagaagatgaagaagaggaaagttggtatatt
ttatgatttgaatgacaacaagagtgaaattattcatttttggctttagaagttgattat
tatcctcaatggcatgctgcaagagatcctgagtctggacagatattgaatgctgcattt
tttaactatgctagtgttgattcttctgaaacaggtcgtccagttgttttggttagattt
aattctgagtgatgacagatattttgtaatcttactaatcagcatgttggtgaacaaatg
gcaatttttgttggctgacaacttaggacagctccagttataagagaaagtatttgtggt
tgaacagctcagatagatggtgattttgattcacagtgagctagagagcttgctgatagt
ttaaacgaatgagcaatgccggccccattacttttgtctcaagaagaaatggtttctcct
acattgtgagaaaatgctcttaatgcggctttgattgctgcttgagtttgatttttcttg
atatttattttcatgatatttttctatggttggaagatgtgattagtttctttgattacg
ttactattttttctaacaattcttttctgacttgttaaggtgctttgatatgcgttatcc
cttagttgaatagctgcagtaatattgagtatatgaatagctgtggatgcaaatgtgctt
atttttgaaagagttagagaagaaatgaaatcttgaaaatgaaaaatattgtcaatacat
gactgatttgcaagaagtatatcggcaataagagactgaaatcttactacttgattgatt
ggtcttcttctatttatgatatgaacaaatgtgtttagaggttttggtactatgatgata
gtaaatattgctttgatactagcagtagttgtgccgttgacgaaattgcttttgctttta
atttatgattatactgaagaagattctactgaagaagctactagtgttgttcaagcataa
DBGET
integrated database retrieval system
