Candidatus Absconditicoccus praedator: HLG78_04560
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Entry
HLG78_04560 CDS
T07729
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aprd
Candidatus Absconditicoccus praedator
Pathway
aprd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aprd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HLG78_04560 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprd03019
]
HLG78_04560 (groL)
03110 Chaperones and folding catalysts [BR:
aprd03110
]
HLG78_04560 (groL)
03029 Mitochondrial biogenesis [BR:
aprd03029
]
HLG78_04560 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aprd04147
]
HLG78_04560 (groL)
Enzymes [BR:
aprd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HLG78_04560 (groL)
Messenger RNA biogenesis [BR:
aprd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HLG78_04560 (groL)
Chaperones and folding catalysts [BR:
aprd03110
]
Heat shock proteins
HSP60 / Chaperonin
HLG78_04560 (groL)
Mitochondrial biogenesis [BR:
aprd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HLG78_04560 (groL)
Exosome [BR:
aprd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HLG78_04560 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HLG78_04560 (groL)
Exosomal proteins of breast cancer cells
HLG78_04560 (groL)
Exosomal proteins of colorectal cancer cells
HLG78_04560 (groL)
Exosomal proteins of bladder cancer cells
HLG78_04560 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Rhamnogal_lyase
DUF4678
Motif
Other DBs
NCBI-ProteinID:
UFX83373
LinkDB
All DBs
Position
946267..947928
Genome browser
AA seq
553 aa
AA seq
DB search
MAKTIRYGDDSRKQVYSGIKKVADAVSVTMGPKGRNVILEKSYGAPTVTNDGVTVAKEIE
LEDHLENIGAELLKEAANKTNDAAGDGTTSTAVLVDAIVNEGLRYVSSGVNPFALGRGLH
KATEKVVEELGKQSKAVDTKEQIRQVATISAQDEEVGEHIAEVMEEVGNDGVITVEEGRS
LGLEKDVVKGMQFDQGYVSPYFVTDTGRMESVVEKPSIIITDKKISSIQEILPLLEQISN
KGKKDIVLIAEEIEGEALTTLVLNKLKGVLNVLTVKAPGFGDRKKEMLKDIATVTGGQVI
TEEVGLSLENATMDVVGQAEKVISTKDNTTIVGGKGNENDINSRVQEIRVQIDETTSDYD
KEKLQERLARLVGGVAVIRVGAATETEMKNKKYKIEDALNATRAAVSEGIVAGGGTALLS
IGKVLDGYQLDDKDEQIGVEIIRKATEYPARQISKNAGYKGDLVIEKVKEKNQANYGFNA
KTGEYEDLLDKGVIDPAKVVRESLQNSTSSAAMLLTTDAVISDIPKKDDDKGGDDMGGMG
GMGGMGGGMPGMM
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaacaataagatatggggatgattcaagaaaacaagtttattcaggtatcaaa
aaagttgcagatgcagtttctgtaacaatgtgaccaaagtgaagaaatgtaatactagaa
aagtcttatggtgcacctactgtaactaacgatggtgttactgtagcaaaagaaatagag
cttgaagatcatttagaaaatatttgagcagagcttttgaaagaagcagcaaacaaaact
aatgatgctgcaggtgatggtactacttctacagcagtgcttgtagatgctatagttaat
gagtgacttagatatgtgagttcttgagtaaatccatttgctctatgaagaggtcttcac
aaagcaactgaaaaagtggtagaagaactttgaaaacaatctaaagcagtagatacaaaa
gaacaaattagacaggtagctaccatatctgctcaagatgaggaagtttgagaacatatt
gctgaggttatggaagaagtttgaaatgattgagtaataactgtggaagaatgaagatct
ttgggtcttgagaaagatgtagtaaaaggtatgcagtttgatcaatgatatgtaagtcct
tattttgttacagatacatgaagaatggagtctgtggttgagaaaccatcaatcataatc
acagacaaaaaaatctcttctatccaagaaatacttcctttgcttgaacaaatatccaat
aaaggtaaaaaagatattgttcttatagcagaagaaatagaatgagaagctttgacaaca
ttggtgttgaataaactaaaatgagttttgaatgttcttacagtgaaggctcctgggttt
ggagatagaaagaaagaaatgcttaaagatatagctacagtaacatgatgacaagtaatt
acagaagaagttggtctgtctttggaaaatgcaactatggatgttgttggacaagcagaa
aaggttatttctactaaagacaacacaacaatagtatgaggaaaaggaaatgaaaatgat
ataaattcaagagttcaagaaataagagtacaaatagatgaaactacttctgattatgat
aaagaaaaacttcaagaaagattagcaagacttgtatgaggagtagctgtgataagagtt
ggtgctgctacagaaacagaaatgaaaaacaagaaatacaaaattgaagatgcattgaat
gctacaagagcagctgtatctgaatgaatagttgcttgatgatgaactgcattgttaagt
attggtaaagttttggatggttatcaacttgatgataaagacgaacaaatttgagtagaa
ataataagaaaggcaactgaatatcctgcaaggcaaatttctaaaaatgcttgatacaaa
ggagatttagtgatagaaaaagttaaagaaaaaaatcaagcaaactattgatttaatgca
aaaacttgagaatatgaagatttgttggataaatgagtaatagatccagctaaagtagta
agagaatcattgcagaactcaacaagttcagctgcaatgcttttgactactgatgctgta
atatctgatattccaaagaaagatgatgataaatgatgagatgacatgtgaggaatgtga
ggtatgtgaggtatgtgatgaggaatgcctggaatgatgtaa
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