Candidatus Absconditicoccus praedator: HLG78_04740
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Entry
HLG78_04740 CDS
T07729
Name
(GenBank) S1 RNA-binding domain-containing protein
KO
K06959
protein Tex
Organism
aprd
Candidatus Absconditicoccus praedator
Brite
KEGG Orthology (KO) [BR:
aprd00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
HLG78_04740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
S1
HHH_3
Tex_central_region
HHH_9
YqgF
HHH_7
PsbU
S1_RRP5
OB_RRP5_4th
UvsW-1
Spt6_S1
Terminase-T7_RNaseH-like
Motif
Other DBs
NCBI-ProteinID:
UFX83407
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Position
990279..992366
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AA seq
695 aa
AA seq
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MQEEESITIQEPNYIELISKNLNIGQGQVQTVLNLTSEGATVPFISRYRKEQTNNLDENQ
IREILELRKKEKNLHLAKQKAINGIHEQGKLTNDLQDNILNCQTLKEVEEIYKPYKSKKK
TKAMIAIEKGFEPVAHNLLNNILQIPDELLQQYAQEEILEGAVQIIASWISSNSQLRHKL
LNTLYSLGSISSSYKSEKMLEKLNPKEKSQIPKFEIYKNFTIQISKIKPYQTLALNRGES
LGILNVKILKDEDIFAKIQKYYLNSLEIKNQLNEYLLEGFKTGYNALFESVERQIRSELT
EKAHDEAIVTFQQNLKSLLMTKPQYGQKILAIDPGFKTGCKITILDELGDPQTFDKVYLE
QKQETINKILDLTNKYNIQTIVIGNGTGNEKLQELINNEFEGDIYIVNESGASVYSVSKT
AKEEFPNYQDVDIGTISIGRRFIDPLAELVKVPVGSIGVGLYQHDIPNKKLEEKLNYVVE
DCVNNVGININTASIHLLNHISGINKTQAKKIFNNKPYQSRQELQKILGPKAYQQAIGFL
RVPESSETLDNTDIHPEQYQLAKYIISNNKTQPDDQMPEMYPDVTQTTIDFIRKAYKNIG
NDPRTNFAHQKAQQPITIEQLKEGDMLQGIVRNVVAFGAFVDVGLKNDGLVHISELANEF
VSNPMDIVKVGDTVDVKVIGIDEENGKVQLSMKDS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagaagaaagtattactatccaagaaccaaattatattgaactgataagcaaa
aacttaaatattggtcaatgacaagtacaaaccgttttgaatctaacatcagaatgagct
acagtaccttttatttctcgttacagaaaagagcaaaccaacaatctggacgaaaaccaa
ataagagaaatcctggaacttaggaaaaaagaaaaaaatctacaccttgccaagcaaaaa
gccatcaactgaatccatgaacagtgaaagctaaccaatgatttacaagacaacatccta
aactgccaaactctcaaagaagtagaagaaatctacaaaccctacaagtccaagaaaaaa
acaaaagctatgattgctatagaaaaatgatttgagcctgtagcccataacctgctcaac
aacatcttacaaatccctgatgaactactccaacaatatgcccaagaagaaatactagaa
tgagctgtacagattatagcaagctggattagttcaaactcacagcttagacataaactg
ctaaatactctatactcattaggaagcatatcatcatcatacaaatcagaaaaaatgctt
gaaaaactcaacccaaaagaaaaatctcaaattcccaagtttgaaatatacaaaaacttc
acaatccaaatttcaaaaatcaaaccttatcaaaccctagctctcaacagatgagaaagt
ctaggaattttgaatgtcaaaatcctcaaagatgaagatatttttgcaaaaatacaaaaa
tactacctcaattctttggaaataaaaaaccaactcaatgaatacctacttgaatgattc
aaaacctgatacaatgcactttttgagtctgtagaaagacaaattaggtcagagcttacc
gaaaaagctcacgatgaagcaatagttactttccagcaaaacctcaaatctttgcttatg
accaaaccacaatactgacaaaaaattcttgcaatagatccttgattcaagacttgatgt
aaaatcaccatactggacgaacttggagatcctcaaacttttgacaaagtatatctggaa
caaaaacaagaaacaatcaacaaaatactggaccttaccaacaaatataatatccaaact
atagtaatatgaaactgaacctgaaatgaaaaactccaggaactcatcaacaatgaattt
gaaggtgatatctatattgttaatgaatccggtgcttcggtttattctgtttccaaaaca
gccaaagaagaatttccaaattaccaagatgttgatatctgaactatatctattggaaga
aggtttatagatccactggcagaacttgtaaaagtaccggtaggaagtatatgagttggg
ctttatcaacacgatattcctaacaaaaaactagaagaaaaactaaattatgtggtagaa
gactgtgtaaataatgttggtataaacatcaacacagctagcattcacttactaaatcac
atatcctgaatcaacaaaactcaagccaaaaaaatcttcaacaacaaaccttatcaatca
agacaagaacttcaaaaaatacttggacccaaagcataccaacaagctatatgattccta
agagttccagaaagcagtgaaactctggacaacaccgatatccatccagaacaatatcag
cttgcaaaatatataatatccaacaacaaaacacaacctgatgaccaaatgccagaaatg
tatcctgatgttactcaaacaacaattgattttatccgaaaagcttataaaaatattggg
aatgacccaagaactaattttgctcaccaaaaagcccaacaaccaatcactatagaacaa
ctcaaagaatgagatatgctacaaggtatagtaagaaatgtagtagcttttggagctttt
gtggatgttggattaaagaatgactgattagtgcatatttctgaacttgccaatgaattt
gtatccaaccctatggatatagtaaaagttggtgatactgtagatgtcaaagtaatatga
atagatgaagaaaatggtaaagtccagctaagtatgaaagatagctaa
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