Actinosynnema pretiosum: CNX65_00030
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Entry
CNX65_00030 CDS
T05092
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
apre
Actinosynnema pretiosum
Brite
KEGG Orthology (KO) [BR:
apre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apre03032
]
CNX65_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
apre03400
]
CNX65_00030 (gyrB)
Enzymes [BR:
apre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CNX65_00030 (gyrB)
DNA replication proteins [BR:
apre03032
]
Prokaryotic type
DNA Topoisomerases
CNX65_00030 (gyrB)
DNA repair and recombination proteins [BR:
apre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CNX65_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ATE51871
UniProt:
A0A290YYN5
LinkDB
All DBs
Position
6705..8678
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AA seq
657 aa
AA seq
DB search
MAAQKKDYGASSITVLEGLEAVRKRPGMYIGSTGERGLHHLIQEVVDNSVDEAMAGYASK
VVVTLLANGGVRVVDDGRGIPVDLHPVEGKPTLEVVLTKLHAGGKFDSDSYAVSGGLHGV
GISVVNALSTAVDVEVKRQGFTWNQRFEASKPAHELERGVPTSETGTTITFWADPAIFET
TDYNIETISRRLQEMAFLNKGLSIVLRDERVAEEGAEEADAEGHVAKVRERVFHYPGGLE
DFVRHLNHTREAVHQKVVSFEAKGDDLEVEVAMQWNTGYTPSVYTFANTINTHEGGTHEE
GFRAALTRVVNEYARDKKLIKEKDANLTGDDIREGLAAIISVKLKEPQFEGQTKTKLGNS
EAKSFVQKSTNEHLADWFERHPNEAKTIITKAVSSSQARIAARKARELVRRKGALDIGGL
PGKLKDCRSSNPEECEVYIVEGDSAGGSAKEGRDSMYQAILPIRGKIINVEKARIDRVLK
NTEVQSIITAMGTGIHDEFDVSKLRYHKVVLMADADVDGQHIRTLLLTLLFRFMRPLLEH
GHVYLAQPPLYKIKWQRSEPEYAYSDRERDGLIERGLAAGKKIGKDDNIQRYKGLGEMNA
EELWETTMDPANRVLLQVTMDDAAAADELFSVLMGEDVEARRSFITRNAKGVRFLDV
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcccagaagaaggattacggcgcgtcgtcgatcaccgtgctggaagggctggaa
gcggtccgcaagcgccccggcatgtacatcggctccaccggggagcgcggtctgcaccac
ctgatccaggaggtcgtggacaactccgtcgacgaggcgatggcgggctacgcctccaag
gtcgtggtgacgctgctggcgaacggcggtgtccgggtcgtcgacgacggccgcggcatc
ccggtcgacctccacccggtggagggcaagccgaccctggaggtcgtgctcaccaagctg
cacgcgggcggcaagttcgacagcgactcctacgcggtgtccggcggcctgcacggcgtc
ggcatctccgtggtgaacgcgctgtccaccgccgtcgacgtcgaggtcaagcgccagggt
ttcacgtggaaccagcgcttcgaggccagcaagcccgcgcacgagctggagcggggcgtc
ccgacgtccgagaccggcaccacgatcacgttctgggccgacccggcgatcttcgagacc
accgactacaacatcgagaccatctcgcgcaggctccaggagatggcgttcctcaacaag
gggctcagcatcgtcctgcgggacgagcgggtcgccgaggagggcgccgaggaggccgac
gccgagggccacgtggccaaggtccgcgagcgggtcttccactaccccggcggcctggag
gacttcgtccgccacctcaaccacacgcgcgaggccgtccaccagaaggtggtcagcttc
gaggccaagggcgacgacctcgaggtcgaggtcgcgatgcagtggaacaccggctacacg
ccgtcggtgtacaccttcgcgaacacgatcaacacgcacgagggcggcacccacgaggag
ggcttccgcgccgcgctgacccgcgtggtcaacgagtacgcgcgcgacaagaagctcatc
aaggagaaggacgccaacctcaccggcgacgacatccgcgagggcctcgccgcgatcatc
tcggtgaagctcaaggagccccagttcgagggccagacgaagaccaagctgggcaacagc
gaggccaagtcgttcgtgcagaagtccacgaacgagcacctggcggactggttcgagcgc
caccccaacgaggcgaagaccatcatcaccaaggcggtctcgtcctcgcaggcccgcatc
gccgcccgcaaggcgcgcgagctggtgcgccgcaagggcgccctggacatcggcggcctc
cccggcaagctcaaggactgccgctcctccaacccggaggagtgcgaggtctacatcgtg
gagggcgactccgcgggcggctcggccaaggagggccgggactccatgtaccaggcgatc
ctgccgatccggggcaagatcatcaacgtggagaaggcccgcatcgaccgggtgctcaag
aacaccgaggtccagtcgatcatcacggcgatgggcaccggcatccacgacgagttcgac
gtcagcaagctgcgctaccacaaggtcgtgctgatggcggacgccgacgtcgacggccag
cacatccgcaccctgctgctcaccctgctgttccgcttcatgcggccactgctggagcac
gggcacgtgtacctcgcgcagccgccgctgtacaagatcaagtggcagcggtccgagccg
gagtacgcctacagcgaccgcgagcgcgacggcctgatcgagcggggcctcgccgcaggc
aagaagatcggcaaggacgacaacatccagcgctacaagggcctgggcgagatgaacgcc
gaggagctgtgggagaccacgatggacccggccaaccgggtgctgctccaggtgacgatg
gacgacgccgccgcggccgacgagctgttcagcgtgctgatgggcgaggacgtggaagcc
cgccggtccttcatcacccgcaacgccaagggcgtccgcttcctcgacgtgtga
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