Actinosynnema pretiosum: CNX65_02870
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Entry
CNX65_02870 CDS
T05092
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
apre
Actinosynnema pretiosum
Pathway
apre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNX65_02870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apre03000
]
CNX65_02870
03400 DNA repair and recombination proteins [BR:
apre03400
]
CNX65_02870
Enzymes [BR:
apre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CNX65_02870
Transcription factors [BR:
apre03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CNX65_02870
DNA repair and recombination proteins [BR:
apre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CNX65_02870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ATE52365
UniProt:
A0A290Z038
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All DBs
Position
610011..611195
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AA seq
394 aa
AA seq
DB search
MIVDGVVDREGVPGLATRLGYSVRQVERRLLAELGSGPLAIARARRARTARLLVETTALP
MTEIAVAAGFASVRAFNETVRELFGRSPTDLRGGRRAPGGEPGAVVLRLPFLGPLHAPSL
FGPLVANAVPGVEEWRDGAYRRTLRLPHGHGVVSLRPRADHVECDLTLTDSRDLPVAISR
CRRALDLDADPAEVDGALRADPALRPLVDAAPGTRVPGVVDGAECAVRALLGEGAGMGMG
AGASTAAGKSSGWAHRVVREAGEPVPDPAGGGLTHLFPTPQALLDLDPALLPPHARAPLT
ALLTALVGGVDLGAGADRAEARSALRCAGERVLDAVLTRSLGDPDGFCPDDPAVRAAAGG
IGLPVTAAALADRSRAWRPWRAYAARYLLGRTPT
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgacggcgtggtcgaccgggagggcgtgccgggcctcgccacccggctcggc
tacagcgtccgccaggtcgagcgccgcctcctggccgagctgggctccggcccgctcgcc
atcgcccgcgcccgccgcgcccgcaccgcccgcctcctggtcgagaccaccgccctcccc
atgaccgagatcgccgtggcggccggcttcgcgagcgtgcgcgcgttcaacgagaccgtg
cgcgagctgttcggccgctcgcccaccgacctgcgcggcggtcgccgggcccccggcggc
gaaccgggcgcggtcgtgctgcggttgccgttcctcggcccgctgcacgcgccgtcgctg
ttcgggccgctggtcgcgaacgccgtccccggcgtcgaggagtggcgcgacggcgcctac
cgccgcacgctgcgcctcccgcacggccacggcgtggtctcgctgcgcccgcgcgccgac
cacgtcgagtgcgacctgaccctcaccgactcccgcgacctcccggtcgccatctcccgc
tgccgccgcgcgctggacctcgacgccgacccggccgaggtcgacggcgccctccgcgcg
gaccccgccctgcgcccgctggtcgacgccgcaccgggcaccagggtccccggcgtggtc
gacggcgcggagtgcgcggtgcgcgccctgctcggcgaaggcgcgggcatgggcatgggc
gcgggcgccagcacggccgcgggcaagagctcgggctgggcgcaccgggtggtgcgcgag
gcgggcgagcccgtcccggacccggcgggcggcggcctgacccacctgttcccgacgccg
caagcgctcctggacctggacccggccctgctgcccccgcacgcccgcgccccgctcacc
gccctgctcaccgcgctggtgggcggcgtcgacctgggcgcgggcgcggaccgcgccgag
gcccggtcggcgctgcgctgcgcgggcgagcgcgtgctggacgccgtcctcacccgctcg
ctgggcgacccggacggcttctgccccgacgaccccgccgtgcgcgccgccgcgggcggg
atcggcctgccggtcaccgccgccgcgctggccgaccgctcccgcgcgtggcgcccgtgg
cgcgcctacgcggcccgctacctgctgggccgcaccccgacctga
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