Actinosynnema pretiosum: CNX65_04205
Help
Entry
CNX65_04205 CDS
T05092
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apre
Actinosynnema pretiosum
Pathway
apre03420
Nucleotide excision repair
apre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CNX65_04205
03430 Mismatch repair
CNX65_04205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apre03400
]
CNX65_04205
Enzymes [BR:
apre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CNX65_04205
DNA repair and recombination proteins [BR:
apre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CNX65_04205
MMR (mismatch excision repair)
Other MMR factors
CNX65_04205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ATE52585
UniProt:
A0A290Z0S5
LinkDB
All DBs
Position
complement(905827..909864)
Genome browser
AA seq
1345 aa
AA seq
DB search
MPHVVAAGGVQRGGAVPHASPADIADALGLHPPTPEQAAVIASPAAPALVVAGAGAGKTE
TMAARVVYLVANGVVTPDRVLGLTFTRKAARQLGERVRGRLRRLAGSPLLDRLDPSGRRR
AAVLTTEPVVLTYHAYAGRLVSEHGLRLPVEPGVRLLTETAAWQLAHRVVSAWTQDLDTD
KIPTTITSYLLSLAGELGEHLVEPEQLLAHAEHLCALIEHAPKAPRQKDALPEKLQEIVD
AQRLRVALLPLLDAYRARKRRDAVLDFADQMSLAARLATGHPEVVEGERERYGAVLLDEY
QDTGHAQRVLLRALFGDGDPMPVTSVGDPAQAIYGWRGASAANLPRFREDFPPADKYELL
TSFRNPPEVLHLANAVSGPLRAAGLDVAPLRARDGVEPGDVRIGLFPDVRAELEWLADTV
AEQWRAHVDTSDEPPTAAVLVRRRSDMPAIAAVLRDRGLPVEVVGLGGLLDEPEVRDLTS
ALRVLVDPLAGTAATRLLTGSRWRIAAFDLAAMWQRARDLAGAPARKSPDDDPLSVLADA
LPGEHSEQAGLADALDDPGDPSAYSAEGYRRIRRLGAELAALRRRLTQPLPELVADVERT
LLLDIEAVARPGGVGRAHLDAFADVVSDFAAASPAATLPALLDYLRTAEHAEDGLAPGEV
EVVDNRVQLVTMHSAKGLEWRIVAVPHVVKDVFPGRRKSASWLKSVTELPAALRGDAQDL
PELRVPGGANRKEVEEALDRHADEFEERRLVEERRLLYVALTRSEHSLLVSGHWWGETGA
SPKGPSAFLTELREVVAGAEHPPADVVTWAPAPGLEDENPLAAQAKTAQWPADPLGSRRD
AVSEGAAMVVAALDRLREAAEHEPPGGTDEPAAAEPETGTADAGEAGEEWVPPDDEWLPS
DEEEPPPPPEEPDGDWGEWTTPDEPWDDGAPLDAPEAGKADTAGATEVVDAPEAAAPEGS
APETTEPETAAPGAATPAPGPGAGAISAARLSAGGGVSAVLPDAETTTLATDTATPSGFA
PEGDSVSPEEADLPEEPSTPTAPVPATPETTDPAPADPESSDPAPADPRVSTPVPTDPRV
SASIPTDPRVSASIPTDPEIGAPVPTDPQTSDPDAADPEGWARDVDVLLAERAAAMDRRE
RVLLPEHLSVSQLVELATDPDQLARRLRRPLPFPPNPLARRGTAFHTWLERRFGAVRLLE
LDELPGAADEDAVPDGELGRLQEAFLASAWADRTPHAVEVPFEAEVDGLAVRGRMDAVFA
DPDGGWTVVDWKTGRVPEADRVPSLSVQLAAYRLAWASLSGSPVELVRAAFHYVRDDRTL
RPADLLDAEGLRALIRTVPDLRPKE
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgccccacgtggtcgcggcgggtggtgtccagcggggtggtgcggttccgcacgcctcg
cccgccgacatcgccgacgccctcggcctgcacccgccgacgcccgagcaggccgccgtc
atcgcctcgcccgccgcacccgcgctggtcgtggcgggcgcgggcgcgggcaagaccgag
accatggccgcgcgcgtcgtctacctggtcgcgaacggcgtcgtcacgcccgaccgggtc
ctcggcctcaccttcacccgcaaggccgcccggcagctcggcgagcgggtgcgtggacgg
ctgcgccgcctcgccgggtcgccgctgctggaccggctcgacccgtccggccgccgccgc
gccgccgtgctcaccaccgagccggtcgtgctcacctaccacgcctacgcgggtcgcctg
gtgagcgagcacgggctgcgactgcccgtggagcccggcgtgcggctgctcaccgagacc
gcggcgtggcagctcgcgcaccgcgtggtgtcggcgtggacccaggacctcgacaccgac
aagatccccaccacgatcacctcctacctgctctccctcgcgggcgagctgggcgagcac
ctggtcgagcccgagcagctcctcgcgcacgccgagcacctgtgcgcgctgatcgagcac
gcccccaaggcgccgaggcagaaggacgctctgccggagaagctccaggagatcgtggac
gcccagcgcctgcgcgtcgccctgctgccgctgctcgacgcctaccgggcccgcaagcgc
cgcgacgccgtcctggacttcgccgaccagatgagcctcgccgcccgcctggccaccggg
cacccggaggtcgtcgagggcgagcgcgagcgctacggcgccgtgctgctcgacgagtac
caggacaccggccacgcccagcgcgtgctgctgcgcgccctgttcggcgacggcgacccg
atgccggtcacctcggtcggcgaccccgcccaggccatctacggctggcgcggcgcgagc
gcggccaacctgccccggttccgcgaggacttcccgcccgccgacaagtacgagctgctc
accagcttccgcaacccgcccgaggtgctgcacctggcgaacgccgtgtccggtccgctg
cgcgcggcgggcctggacgtggcgccgctgcgggcgcgcgacggcgtcgagccgggcgac
gtgcggatcggcctgttccccgacgtgcgggccgagctggagtggctggcggacaccgtc
gccgagcagtggcgcgcccacgtggacaccagcgacgagccgccgaccgcggccgtgctg
gtgcgccgccgctccgacatgcccgcgatcgccgccgtgctgcgtgaccgggggctgccg
gtggaggtcgtcggcctcggcgggctgctggacgagccggaggtgcgcgacctcaccagc
gccctgcgcgtcctggtcgacccgctcgcgggcaccgccgccacccggctgctcaccggt
tcccgctggcggatcgccgccttcgacctggccgcgatgtggcagcgcgcccgcgacctg
gcgggggcgcccgcgcgcaagtccccggacgacgacccgctgtccgtgctggccgacgcg
ctgcccggcgagcactccgagcaggccgggctcgcggacgcgctcgacgaccccggtgac
ccgtccgcttactcggccgagggctaccgccgcatccggcggctgggcgcggagctggcc
gcgctgcgcaggcggttgacccagccgctgccggagctggtcgccgacgtcgagcggacc
ctgctgctggacatcgaggcggtcgcccggccgggcggggtggggcgggcgcacctggac
gcgttcgcggacgtggtgtcggacttcgcggcggccagcccggcggcgaccctgcccgcg
ctgctggactacctgcgcaccgccgagcacgccgaggacggcctggcgcccggcgaggtc
gaggtggtggacaaccgggtgcagctggtgacgatgcactcggccaagggcctggagtgg
cggatcgtcgccgtgccgcacgtggtgaaggacgtcttccccggtcggcggaagtcggcg
tcgtggctgaagtcggtgaccgagctgcccgccgcgctgcgcggcgacgcccaggacctg
ccggagctgcgggtgccgggcggggcgaaccgcaaggaggtcgaggaggcgctcgaccgg
cacgcggacgagttcgaggagcggcggctggtcgaggagcggcggctgctgtacgtggcg
ctgaccaggtccgagcacagcctgctggtgtcgggccactggtggggcgagacgggtgcg
agcccgaagggcccgtcggcgttcctgaccgagctgcgcgaggtcgtggcgggcgcggag
cacccacccgccgacgtggtcacctgggcccccgcgccgggcctggaggacgagaacccc
ctggcggcgcaggcgaagacggcccagtggcccgccgacccgctgggctcgcgccgcgac
gcggtgtccgagggcgcggccatggtcgtcgccgcgctggaccggctgcgcgaggccgcg
gagcacgagccgcccggcgggaccgacgagcccgccgcggccgaacccgagaccgggacg
gccgacgcgggtgaggcgggcgaggagtgggtgcccccggacgacgagtggctgccctcg
gacgaggaggaacccccaccgccaccggaggaaccggacggcgactggggcgagtggacg
accccggacgagccctgggacgacggcgcccccctggacgccccggaggcggggaaggcg
gacaccgcaggcgccaccgaagtggtcgacgcgcccgaggcggcggcccccgagggcagt
gccccggagaccaccgagccggagaccgccgcccccggagcagccacccccgcgcccggt
ccgggcgcaggggcgatctcggctgcccggctgagcgcgggcggcggggtctccgccgtg
ctgcccgatgccgaaacgaccaccctcgccaccgacaccgctaccccgtcggggttcgct
cccgagggtgattcggtgtcccccgaagaggcagacctccccgaggagccctccaccccc
accgcccccgtccccgccaccccggagaccaccgatcccgcccccgccgatcccgagagc
agcgatcccgcccccgccgatcccagagtcagcacccccgtccccactgatcccagagtc
agcgcctccatccccaccgatcccagagtcagcgcctccatccccaccgatcccgagatc
ggcgcccccgtccccaccgacccccagaccagcgatcccgacgccgccgatcccgagggc
tgggcgcgggacgtcgacgtgctgctcgccgagcgggccgccgccatggaccggcgcgag
cgcgtcctgctgcccgagcacctgtcggtcagccagctcgtcgagctggccaccgacccc
gaccagctggcccgccgcctgcgccgcccgctgccgttcccgccgaaccccctcgcccgc
cggggcaccgcgttccacacctggctggagcggcggttcggggcggtccggctgctggag
ctggacgagctgcccggcgccgccgacgaggacgccgtgccggacggggagctggggcgg
ctgcaggaggcgttcctggccagcgcctgggccgaccgcacgccgcacgccgtcgaggtg
cccttcgaggccgaggtggacgggctcgcggtgcgcgggcggatggacgccgtgttcgcc
gaccccgacggcgggtggaccgtcgtggactggaagaccggccgggtgcccgaggccgac
cgggtgccgtcgctgtccgtgcagctcgcggcgtaccggctggcctgggcgtcgctgtcg
ggcagcccggtggagctggtcagggccgccttccactacgtccgcgacgaccgcacgctc
cgccccgccgacctgctcgacgccgaggggctgcgcgccctcatccggacggtgcccgat
ctccgcccgaaggagtga
DBGET
integrated database retrieval system
