Actinosynnema pretiosum: CNX65_09230
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Entry
CNX65_09230 CDS
T05092
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
apre
Actinosynnema pretiosum
Pathway
apre00040
Pentose and glucuronate interconversions
apre01100
Metabolic pathways
apre02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
apre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CNX65_09230
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CNX65_09230
Enzymes [BR:
apre01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CNX65_09230
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
ATE53454
UniProt:
A0A290Z393
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Position
2047402..2048352
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AA seq
316 aa
AA seq
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MHQKSTRVHWRTGLVAAVVLAGASVAAPSAGAASFNLEGWATQGGGTTGGGSASPTTVTS
ASQFTTAVQASGAAVIRFSGTITLSSMTKVASNKTILGVGSGATITGQGLNIANASNVIV
RNVNFRNWGDDAINVQYSTRVWLDHNSFANGSDGALDIKRASDYVTVSWNKFSSHDKTML
LGHSDDNASEDTGKLRVSYHHNWFDGTNQRHPRVRFGNPVHVYNNYYGGVTSYGVASTKD
AGVLVEGNYFENTKDPFHRGEGSSPAASLVARNNHFVNSGSGDQGGSVKSIPYSYALDAA
SSVKSAVTGGAGTGKI
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagaagtcaacccgcgtgcactggcgcaccgggctcgtcgccgccgtcgtgctg
gcgggcgcgtccgtcgcagcccccagcgccggagccgcctcgttcaacctcgagggttgg
gcgacgcagggcggcggcaccaccggtggaggcagcgcctccccgacgaccgtcaccagc
gcctcgcagttcaccacggcggtgcaggcgtcaggagcggccgtcatccggttctccggc
acgatcaccctgtccagcatgaccaaggtcgcgtccaacaagacgatcctcggtgtcggc
tccggcgccacgatcaccgggcagggcctgaacatcgccaacgcgtccaacgtgatcgtg
cgcaacgtcaacttccgcaactggggtgacgacgcgatcaacgtgcagtactcgacgcgg
gtgtggctcgaccacaactcgttcgccaacgggtcggacggcgcgctggacatcaagcgg
gcctcggactacgtcacggtgtcctggaacaagttcagcagccacgacaagaccatgctg
ctcgggcacagcgacgacaacgcgtccgaggacaccggcaagctgcgcgtgagctaccac
cacaactggttcgacggcaccaaccagcggcaccccagggtgcggttcggcaaccccgtg
cacgtgtacaacaactactacggcggggtgacctcgtacggcgtcgcgtcgaccaaggac
gcgggcgtcctggtcgagggcaactacttcgagaacaccaaggacccgttccaccggggt
gagggctcctcgcccgccgcctcgctggtggcgcggaacaaccacttcgtgaactcgggc
agcggcgaccagggcggttcggtcaagtcgatcccctactcctacgcgctggacgcggcc
agttcggtcaagtccgcggtgaccggcggcgcgggcaccggcaagatctga
DBGET
integrated database retrieval system
