Actinosynnema pretiosum: CNX65_11610
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Entry
CNX65_11610 CDS
T05092
Name
(GenBank) DNA topoisomerase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
apre
Actinosynnema pretiosum
Brite
KEGG Orthology (KO) [BR:
apre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apre03032
]
CNX65_11610
03400 DNA repair and recombination proteins [BR:
apre03400
]
CNX65_11610
Enzymes [BR:
apre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CNX65_11610
DNA replication proteins [BR:
apre03032
]
Prokaryotic type
DNA Topoisomerases
CNX65_11610
DNA repair and recombination proteins [BR:
apre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CNX65_11610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
Hint_2
DNA_gyraseA_C
Intein_splicing
LAGLIDADG_3
Motif
Other DBs
NCBI-ProteinID:
ATE53859
UniProt:
A0A290Z4F5
LinkDB
All DBs
Position
2569889..2573305
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AA seq
1138 aa
AA seq
DB search
MARRKGPVTRVDPSAFDSAGAKVIDNSLTTEIEDSYLEYAYSVIHSRALPDARDGLKPVH
RRILFSMNEQNHRPTSPYVKSSRVVGDCFVRGALVSTPSGVRPIEEIVVGDHVLDPAGSP
VRVAQVYENPVSELVRVAFSDGRTMLVTPGQRFRVHAGSEVEWVAARDLVGRRAVALGPD
RASALLGDGDQYAHVLGLLASAGVDGQRLRLVDEGPADAVHGWAIAAGVVVTRDKLPAAG
PGGRDVHVLDLDGHVGVRAAVASGAAPAAVLLQRDRWAAFLAGVFDGAGSVRDGEVVLGV
RTALLAEQVGALLADCGLPATRADGEIRLSGGAAATLGAALLPWARSAAEQDLRELTGAV
EHAVPEVVSVEPAAPDTTYDIQVDADEHAFVVDGLVVHNCMGKYHPHGDTAIYDAMVRLA
QDFSLNTPLIDGHGNFGSPDDGPAASRYTEARMSGAAMLLVGELDEDTVEFRPNYDGSLT
EPAVLPAAFPNLLVNGTSGIAVGMATNMIPHNLGEVVAAARHLVKHPDADLDKLMEFVPG
PDLPTGGMLLGLDEVRKAYETGRGVVRMRATVTTGPLEGSRGRQAITVTELPYGVGPEKI
IEKITDEVNKSKRLTGIADVKDLTDRENGIRLVIECKVGVNPQALLADLYRLTPLEQSFG
INNLVLVDGEPRTLGLKALLEVFLAHRYEVVTRRTRFRRRKREDRLHLVEGLLKALIDID
KVIKLIRRSENAQAAKEGLVSSFELSETQAAYILDTPLRRLTRFDSIELEGEQERLLKEI
AELSTILDDDKVLRRVVSNELGKVAKDLSVERRTTLLDGDLKEVLAASRTSGPLEVADDP
CQVVLSATGLVARTAAESEEAVEGRKRSGRAKHDAVAATVHTTARGQVLLVTSRGRAFKT
DVLPLPVLPQGEGTLSLSGGVPVRELVDLDAGERVVGIAPLGETDSPGLALGTRQGVVKV
CAPEWPVRSDEFEVIGLKAGDEVVGAQWLADGQESLVFVSSEASLLRYAASLVRPQGLRG
GGMAGITLPGEASVVFFGAVRTDDAEHGEPVVVTSTGQSVKVTPFDLYPAKGRATGGVRA
HRFLKGETGLALAWVGARPAAVTESGAAVELPEVDPRRDGSGAPHPGPDVIGHLVERA
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgcaagggacccgtcaccagggtcgacccgtccgccttcgacagcgcgggc
gccaaggtgatcgacaactccctcaccaccgagatcgaggactcgtacctggagtacgcg
tactcggtcatccactcccgcgccctgccggacgcgcgagacggcctcaagccggtgcac
cgccggatcctgttctcgatgaacgagcagaaccaccggccgacctcgccgtacgtgaag
tcctcccgcgtggtcggtgactgcttcgtgcggggcgcgctcgtgtccaccccctccggg
gtgcggccgatcgaggagatcgtggtcggcgaccacgtgctcgacccggcgggttcgccc
gtgcgggtggcgcaggtgtacgagaacccggtgtccgagctggtcagggtggccttctcg
gacggccggaccatgctggtcacgcccggtcagcggttccgggtccacgcgggcagcgag
gtcgagtgggtcgccgcgcgcgacctggtcggccgccgcgcggtcgccctcggccccgat
cgcgcgtccgcgctgctcggggacggcgaccagtacgcccacgtgctgggcctgctcgcc
tcggcgggcgtcgacgggcagcggctgcgcctggtcgacgagggcccggcggacgccgtc
cacggctgggccatcgccgcgggcgtggtcgtgaccagggacaagctgcccgccgccggt
cccgggggccgcgacgtgcacgtgctcgacctggacggccacgtcggcgtgcgcgccgcc
gtcgcctccggggccgcgcccgccgccgtgctgctccagcgcgaccggtgggccgcgttc
ctcgcgggcgtcttcgacggcgccggctcggtccgcgacggcgaggtcgtcctcggcgtg
cgcaccgcgctgctcgccgagcaggtcggcgcgctgctcgccgactgcggactgcccgcg
accagggcggacggcgagatccggctgtccggcggggccgccgccaccctcggcgccgcc
ctgctgccgtgggcccgctcggccgccgagcaggacctgcgcgagctgaccggcgcggtc
gagcacgccgtcccggaggtcgtgtcggtggagccggccgccccggacaccacctacgac
atccaggtcgacgccgacgagcacgcgttcgtcgtggacggcctcgtcgtgcacaactgc
atgggcaagtaccacccgcacggcgacaccgcgatctacgacgcgatggtgcggctggcg
caggacttctcgctgaacaccccgctcatcgacggccacggcaacttcggttcgccagat
gatggaccggctgcctcgcgttacaccgaggcccgcatgtccggcgcggcgatgctgctg
gtcggcgagctggacgaggacaccgtcgagttccgcccgaactacgacggctcgctcacc
gagccggccgtgctgcccgccgcgttcccgaacctgctggtcaacggcacctcgggcatc
gcggtcggcatggccacgaacatgatcccgcacaacctcggcgaggtcgtggcggcggcg
cggcacctggtcaagcacccggacgccgacctcgacaagctcatggagttcgtgcccggc
cccgacctgcccacgggcgggatgctgctgggcctggacgaggtgcgcaaggcgtacgag
acggggcgcggcgtggtgcggatgcgcgccaccgtcaccaccgggccgctggagggcagc
cggggcaggcaggcgatcacggtcaccgagctgccgtacggcgtcggcccggagaagatc
atcgagaagatcaccgacgaggtgaacaagtccaagcggctcaccggcatcgccgacgtc
aaggacctcaccgaccgggagaacggcatccgcctggtcatcgagtgcaaggtgggcgtc
aacccgcaggcgctgctggcggacctgtaccggctcaccccgctggagcagtcgttcggc
atcaacaacctggtgctggtcgacggcgagccgcgcacgctcgggctcaaggcgctgctg
gaggtgttcctggcccaccggtacgaggtggtcacccggcgcaccaggttccgccgccgc
aagcgcgaggaccggctgcacctggtcgagggcctgctcaaggccctgatcgacatcgac
aaggtgatcaagctgatccgccgcagcgagaacgcgcaggccgccaaggagggcctggtc
agctccttcgagctgtccgagacccaggccgcctacatcctggacacgccgctgcgccgc
ctcacccggttcgactcgatcgagctggagggcgagcaggagcggctgctcaaggagatc
gccgagctgtccacgatcctcgacgacgacaaggtgctgcgccgggtcgtgtcgaacgag
ctgggcaaggtcgccaaggacctctccgtcgagcgccgcaccacgctgctcgacggcgac
ctgaaggaggtgctggccgcctcgcgcacctccggtccgctggaggtcgcggacgacccg
tgccaggtcgtgctgtcggcgacgggcctggtggcgcgcaccgccgccgagtccgaggag
gccgtggaggggcgcaagcgcagcggccgggccaagcacgacgcggtggcggcgaccgtg
cacaccaccgcgcgcgggcaggtgctgctggtgaccagcagggggcgcgcgttcaagacc
gacgtgctgccgctgccggtgctgccgcagggcgagggcacgctctcgctcagcggcggg
gtgccggtgcgcgagctggtggacctggacgcgggggagcgggtggtcggcatcgccccg
ctgggcgagaccgactcgccggggctcgcgctcgggaccaggcagggcgtggtgaaggtg
tgcgcgcccgagtggccggtgcggtcggacgagttcgaggtgatcgggctcaaggccggt
gacgaggtcgtgggcgcgcagtggctggccgacggccaggagtcgctggtgttcgtgtcc
tcggaggcgtcgctgctgcggtacgccgcgtcgctggtgcgcccgcagggcctgcgcggc
ggcggcatggccggcatcacgctgccgggggaggcgtcggtggtgttcttcggcgcggtg
cgcacggacgacgccgagcacggcgagccggtggtggtgacctcgaccgggcagagcgtg
aaggtgacgccgttcgacctgtacccggccaaggggcgggcgaccggcggtgtccgggcg
caccggttcctcaagggggagaccgggctggcgctggcgtgggtcggcgcccggcccgcc
gcggtgaccgagtcgggggcggcggtggagctgccggaggtcgacccgcgccgggacggc
tcgggcgcgccgcaccccggtccggacgtcatcgggcacctggtggaacgcgcctag
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