Actinosynnema pretiosum: CNX65_22585
Help
Entry
CNX65_22585 CDS
T05092
Name
(GenBank) type IV secretion protein Rhs
Organism
apre
Actinosynnema pretiosum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Tox-HNH-EHHH
TEN_YD-shell
RHS
T7SS_signal
WXG100
PPE
EspA_EspE
Motif
Other DBs
NCBI-ProteinID:
ATE55729
UniProt:
A0A290Z9S7
LinkDB
All DBs
Position
complement(5324786..5329228)
Genome browser
AA seq
1480 aa
AA seq
DB search
MAAPQDDTSAVTGVGIAESSVDLANGIADGNWVEAGLGGVGVGLEVLSMVIDPVGTVASY
GVGWLMEHVQPLKEALDWLAGDPPVIRAFSETWGNVAAEVKAVAEELGRQDASGWEGAAA
QAFRRANAETADAIAGAGVLAEGIGVGVMVMGEVVAAVRELVRDLVAELVGRLISWALEA
VATLGLATPVIVAQATSAISRMCSRIADLVRKLVKTISNVAPRIRAVVDKLGEIVQKLGR
LGRRADVPGGPDAPSVPNAHAPDGVTGPSGTTSPSGTTTPSGTTTPSGTTAPSGTTAPSS
DAAPSGATSPSSSPDTPAGGQGSSPSSSRAEPDRKPDSSPTPDDPEAASCSADRPFCADD
PIDVATGDVVLSQTDVVLPGLLPLLLTRHHQSRYRSGALFGPSWSSTLDQHVSVSASHVW
LATEDGRLLRYAKPVGDESVLPDFGPRLALRRDGDGYLVDDPRRGTTAEFRPVGDERGAR
SRLPLTAVRRRAGGELVVEHDGAGLPTRVRHSGGYEVAVDTDGGRVTGLRLTSAARAVAL
TRYGYDETGQLAEVVNSSGLPLRFTHDADGRLTSWTDRNGVWYRYVYDDRGRAVTTIGSS
GALNGTFRYEDRRTTHTDTLGNSTTYDLDERGRVIRETNPLGAVTSREWGEREQLLAVTD
PLGRTTRYEHDDDGNVTTVTRPDGSTLTAAYTTGGRDTRVTDPAGGTWLRDHDALGNLVA
ETDPTGATTRFAYDERGHLAATTDPLGAVTRYRTDAAGLITELTDPLGATTRFERDAFGR
VVAETDPLGGTTRTTWTVEGRIASRTRPGGGVERWAYDGEGNVVEHVDELGQVTRTRYTH
FDLPAARTAPDGATTTYAYDTELRLTEVVGPHGLVWRFERDAAGEVVRETDFDGRVTRYA
YDAAGRLAARVNGLGETISYDRDVHGGIVAKHTPSGTSAFDRDPCGRVVRAAGPDVEVLF
ERDARGRVLAETCDGRTTRSEYDAAGRRVRRTTAGGVATGWDYDAAGNPLALRADGGTIT
FRHDALGRQVRRELGRLSVLRSYSPDSRLTDQLVTAGGPVDRRGWRYRPDGNVDGVLDPS
GGRALTLDRRGRVLSVRGPGWDERYEYDAVGNITDASPSGPDDPTAGPRAHEANRLRAAG
RTTYDHDAQGRVVRRRTRTLSGSVLVWTFGWDAEDRLTSASTPDGGTWRYRYDPMGRRVS
KQRLDARGRTVERLDFTWDGALLAEHTGGDGAGSTWEYEPGTTTPVAQLDRAGLDRRFYA
VVADLVGTPTELVDADGAVAWRRTATLWGRTLAQSGPATCPLRFPGQYHDGETGWHYNHL
RHYDPDTGRYASQDPLGLIPSINPGAYVPNPIRFVDPLGLQGCGVSGDEAKQQALADAGV
PPGSEPLETRVTPSTTPGGRQVMQDHQPVFFPEEVYLNNRDELIVFQDHHTGHQFGEGGV
GDQPPHVHVRPYDNPRNGQVPGAEEHYYYDPSLGRPTPAG
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
gtggcggcgccgcaggacgacacgtctgcggttaccggggtcgggatcgctgagtcttcg
gttgacctggccaacgggatcgctgacgggaactgggtcgaggctgggctcgggggtgtc
ggggtcgggctggaagtgctgtcgatggtgatcgacccggtggggacggtcgcgtcgtac
ggcgtggggtggctgatggagcacgtgcagccgctcaaggaggctctggactggttggct
ggggacccgcctgttatccgggccttcagtgagacctggggcaacgtcgcggccgaggtg
aaggcggttgccgaggagttggggcggcaggacgcctccgggtgggagggggctgccgct
caggcgtttcggagggccaacgctgagacggctgacgccatcgccggtgcgggggtgctg
gccgaggggatcggcgttggtgtgatggtgatgggggaggtggtcgccgccgttcgcgag
ctggtgcgggatctggtcgcggagttggtggggcggctgatctcctgggcgttggaggcg
gtggcgaccttggggttggccacgccggtgatcgtggcgcaggcgaccagcgcgatctcg
cggatgtgctcgcggatcgcggacctggtgcgcaagctggtgaagacgatctcgaacgtg
gcgccgcggatccgggcggtggtggacaagctcggtgagatcgtgcagaagctcggcagg
ctcgggcgccgggcggatgttcccggggggccggatgcgcctagcgtgcctaacgcccat
gcgcctgacggggttaccgggccgtcggggaccacgtcgccgtcggggacgaccacgccg
tcggggactacgacgccctcggggaccaccgcgccgtcggggaccaccgcgccttccagc
gacgctgctcccagcggtgccacatcaccctccagcagcccggacaccccggccggcggt
cagggctccagtccgtccagcagccgcgccgaacccgaccgcaagcccgacagctccccg
acgccggacgaccccgaagccgcctcctgctccgccgaccggcccttctgcgccgacgac
cccatcgacgtcgccaccggggacgtcgtgctctcgcagaccgacgtcgtcctccccggt
ctcctcccgctcctgctcacccgccaccaccagtcccgctaccgctccggcgcgctcttc
ggcccctcctggtcctccaccctcgaccagcacgtctccgtcagcgcctcccacgtctgg
ctcgccaccgaggacggcaggctgctgcggtacgccaagccggtgggggacgagtcggtc
ctgccggacttcgggccgcgcctcgcgctgcgccgcgacggggacgggtacctggtcgac
gacccccggcgtggcaccaccgccgagttccggcccgtcggcgacgagcggggcgcgcgc
tcccggttgccgctgaccgccgtgcggcggcgcgcgggcggggagctggtggtcgagcac
gacggggccgggcttcccaccagggtgcgccactccggcggctacgaggtcgccgtggac
acggacggcgggcgggtcacggggttgcggctcacctccgcggcgcgggcggtggccctg
acgcgctacgggtacgacgagaccgggcagctggccgaggtggtcaactcctccggcctg
ccgctgcggttcacgcacgacgccgacgggcggctcacctcgtggaccgaccgcaacggc
gtctggtaccgctacgtctacgacgaccgcggccgggccgtcaccaccatcgggtcctcc
ggcgccctcaacggcacgttccgctacgaggaccgccgcaccacccacaccgacaccctc
ggcaactccaccacctacgacctcgacgagcgcggtcgggtcatccgcgagaccaacccg
ctcggggcggtcaccagccgcgagtggggcgagcgggagcagctgctcgccgtcaccgac
ccgctcgggcgcaccacccgctacgagcacgacgacgacggcaacgtcaccaccgtcacc
cgccccgacggcagcaccctcaccgccgcctacaccaccggcgggcgcgacacccgcgtc
accgacccggcgggcgggacctggctgcgcgatcacgacgcgctcggcaacctcgtcgcc
gagaccgaccccaccggcgccaccacccgcttcgcctacgacgagcgcggccacctcgcc
gccaccaccgacccgctcggcgcggtcacccgctaccgcaccgacgccgcgggcctgatc
accgagctgaccgacccgctcggcgccaccacccgcttcgagcgcgacgccttcggccgc
gtcgtcgccgagaccgacccgctcggcggcaccacccgcaccacctggaccgtcgagggg
cggatcgcctcgcgcacccggcccggcggcggcgtggagcggtgggcctacgacggcgag
ggcaacgtcgtcgagcacgtcgacgagctcggccaggtcacccggacccgctacacccac
ttcgacctgcccgccgcccgcaccgcgcccgacggcgccaccaccacctacgcctacgac
accgagctgcgcctgaccgaggtcgtcgggccgcacgggctggtgtggcggttcgagcgc
gacgcggcgggcgaggtggtgcgcgagaccgacttcgacgggcgcgtcacccgctacgcc
tacgacgccgccggacggctcgccgcccgcgtcaacgggctcggcgagacgatctcctac
gaccgggacgtgcacggcggcatcgtcgccaagcacaccccgagcggcacgtccgcgttc
gaccgggacccgtgcgggcgcgtggtgcgcgcggccgggcccgacgtcgaggtgctcttc
gagcgcgacgccaggggccgggtcctcgccgagacctgcgacggccgcaccacccgctcc
gagtacgacgcggcgggcaggcgggtgcgccggaccacggcgggcggggtcgccaccggc
tgggactacgacgcggcgggcaacccgctggcgctgcgcgcggacggcggcacgatcacc
ttccggcacgacgcgctcggcaggcaggtgcgccgcgagctggggcgcctgagcgtgctg
cggtcctactcgccggacagcaggctcaccgaccagctcgtcaccgcgggcgggcccgtg
gaccggcgcgggtggcgctaccggccggacggcaacgtcgacggggtgctcgacccctcg
ggcgggcgggcgctcaccctggaccggcgcgggcgggtgctgtcggtgcgcgggcccggc
tgggacgagcgctacgagtacgacgcggtcggcaacatcaccgacgcctcgccctcgggg
ccggacgacccgaccgccggtccgcgcgcgcacgaggcgaaccggttgcgcgcggcgggc
cgcaccacctacgaccacgacgcgcagggccgtgtcgtgcgccgccggacccgcaccctg
tccggctcggtgctggtctggaccttcggctgggacgcggaggaccggctcacctccgcg
tcgacccccgacggcggcacgtggcgctaccgctacgacccgatgggcaggcgcgtgtcc
aagcagcgcctcgacgcgcggggccgcaccgtcgagcggctggacttcacctgggacggc
gcgctcctggccgagcacaccggcggcgacggggcaggcagcacctgggagtacgagccg
ggcaccaccaccccggtcgcccagctcgaccgggccgggctcgaccggcggttctacgcc
gtcgtcgccgacctcgtcggcacaccgaccgagctggtcgacgcggacggcgcggtcgcc
tggcggcgcaccgccaccctgtggggccgcacgctcgcccagtccggcccggcgacgtgc
ccgctgcggttccccggccagtaccacgacggcgagaccggctggcactacaaccacctg
cgccactacgacccggacaccggccgctacgcctcgcaggacccgctgggtctgatcccg
tcgatcaaccccggcgcgtacgtgcccaacccgatccggttcgtcgacccgctggggttg
cagggctgcggggtcagcggggacgaggccaagcagcaggcgctggccgacgcgggcgtg
ccgcccggctccgagccgctggagaccagggtaacgccgtccaccacgccgggcggcagg
caggtcatgcaggaccaccagccggtgttcttcccggaggaggtctacctcaacaaccgg
gacgagctgatcgtcttccaggaccaccacaccggccaccagttcggcgagggcggggtc
ggggaccagccgccgcacgtgcacgtccgcccctacgacaacccccgcaacgggcaggtc
cccggagccgaggagcattactactatgaccccagcctgggccgaccgactcctgccggc
tga
DBGET
integrated database retrieval system
