Actinosynnema pretiosum: CNX65_28150
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Entry
CNX65_28150 CDS
T05092
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
apre
Actinosynnema pretiosum
Pathway
apre03030
DNA replication
apre03430
Mismatch repair
apre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNX65_28150
03430 Mismatch repair
CNX65_28150
03440 Homologous recombination
CNX65_28150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apre03032
]
CNX65_28150
03400 DNA repair and recombination proteins [BR:
apre03400
]
CNX65_28150
Enzymes [BR:
apre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CNX65_28150
DNA replication proteins [BR:
apre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CNX65_28150
DNA repair and recombination proteins [BR:
apre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CNX65_28150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ATE56677
UniProt:
A0A290ZCF2
LinkDB
All DBs
Position
complement(6624119..6627649)
Genome browser
AA seq
1176 aa
AA seq
DB search
MSDSFAHLHVHTEYSMLDGAAKLKDMFAECERLGMTAAAITDHGNMYGAYDFFRQATAAG
VKPVIGIEAYMAPESRFNKKRVTWGDPGQKADDVSASGAYTHQTIWARTVEGLHNLMKCS
SRASTEGQLGKWPRMDAELLAEHSKGLMATTGCPSGEVQTRLRLGHEKEAYEAAGKWREI
YGADNFFVELMDHGIELERRVRDGLVDIARKLDIPFVVTNDSHYTYAEDREAHEALLCVQ
TGKTLQDPSRFKFDGTGYYLKSPQEMYAIDSSDAWQEGCRNTLLVAEKVDTTDMFAFQNL
MPRYPVPEGMTEADYFREQVWEGMRRRFPGGVDEVHTKQVEFEIGVILQMGFPSYFLVVA
DFINWAKENGIRVGPGRGSAAGALIAYAMGITDLDPLAHGLIFERFLNPDRVSPPDIDID
FDERRRGDVIRYVTDKWGDDKVAQVITFGTIKAKAAIKDSARVLYGQPGYAVADRISKAM
PPAVMGKDIPLSGIFDPQHKRYAEASEVRGLYDTDPQVKEIIDTGRGLEGLIRNAGVHAC
AVIMSAEPLMDHIPVWKRPQDGSIITQFDYPTCETLGLLKMDFLGLSNLTTIDDALKNMA
INGKEPVDLDKLELTDKKTYQLLSKGETLGVFQLDGGPMRDLLRLMRPDNFEDISAVGAL
YRPGPMGANSHTNYALRKNKLQEITPIHPSLAEALEDILGTTYGLIVYQEQVMAIAQKLA
GYTLGQADLLRRAMGKKKKEILDKEFAGFEAGMLANGYPADAIKTLWEILVPFADYAFNK
AHSAAYGLVSYWTAYLKANYPAEFMAALLTTNSDNKDKSAIYLAECRRMGITVLPPDVNE
SEREFVAVGEDVRFGLGAIRNVGANVVDAIIKARKEKGRFTDFSDFLRKVDATVCNKKVV
ESLIKAGAFDSLNHPRKGLHMVHVEAVDAIMLTKKEEARGQFDLFGDGGDDGNGSVFDVR
IPEEHWESKHQLTLEREMLGLYVSGHPLNGVEQVLESYSDASIARILEGDVADGTQVTLG
GILASVTRRVNKNGEPWASAMLEDLAGGIEVLFFPKSYVVHGMSVVEDAIVLVKARVAKR
DDRISLIANDLVVPDLAELGNQALRLKLNASRCDPKLVTSLKEVLSAHPGTTEVHLNLVI
NSSRQTLLKLDDALRVNPTPSLKGDLKALLGPGCLG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgactcgttcgcgcacctccacgtgcacaccgagtactcgatgctcgacggggcg
gcgaagctcaaggacatgttcgccgagtgcgagcggctgggcatgacggccgcggcgatc
accgaccacggcaacatgtacggggcctacgacttcttccgccaggccaccgccgcgggc
gtcaagccggtcatcggcatcgaggcgtacatggcgcccgagtcccggttcaacaagaag
cgcgtcacctggggcgaccccggccagaaggccgacgacgtgtccgccagcggcgcctac
acgcaccagacgatctgggcgcgcaccgtcgagggcctgcacaacctgatgaagtgctcc
agccgcgcctccaccgagggccagctgggcaagtggccgcggatggacgccgagctgctc
gccgagcactccaagggcctcatggccaccaccggctgcccctccggcgaggtgcagacc
cggctgcgcctgggccacgagaaggaggcctacgaggccgcgggcaagtggcgcgagatc
tacggcgccgacaacttcttcgtcgagctgatggaccacggcatcgagctggagcggcgg
gtccgcgacgggctggtcgacatcgcccgcaagctcgacatcccgttcgtggtcaccaac
gactcgcactacacgtacgccgaggaccgcgaggcccacgaggccctgctgtgcgtgcag
accggcaagaccctgcaggacccgagccggttcaagttcgacggcaccggctactacctg
aagtccccgcaggagatgtacgcgatcgactcctcggacgcgtggcaggagggctgccgc
aacacgctgctggtggccgagaaggtcgacacgaccgacatgttcgccttccagaacctg
atgccgcgctaccccgtccccgagggcatgaccgaggcggactacttccgcgagcaggtg
tgggaggggatgcgccgcaggttccccggcggtgtcgacgaggtccacaccaagcaggtg
gagttcgagatcggcgtcatcctgcagatgggcttcccctcgtacttcctggtcgtcgcg
gacttcatcaactgggccaaggagaacggcatccgggtcggccccggccgtggctccgcc
gcgggcgcgctcatcgcgtacgccatgggcatcaccgacctggacccgctggcgcacggc
ctgatcttcgagcggttcctgaacccggaccgcgtcagcccgcccgacatcgacatcgac
ttcgacgagcgcaggcgcggcgacgtcatccggtacgtgaccgacaagtggggcgacgac
aaggtcgcccaggtcatcaccttcggcaccatcaaggcgaaggcggccatcaaggactcc
gcgcgcgtgctctacggccagcccggctacgccgtcgccgaccggatctccaaggccatg
ccgcccgccgtgatgggcaaggacatcccgctgtcgggcatcttcgacccgcagcacaag
cggtacgccgaggcgtccgaggtgcgcggcctgtacgacacggacccgcaggtcaaggag
atcatcgacaccggccgcggcctggagggcctgatccgcaacgcgggcgtgcacgcctgc
gcggtcatcatgtccgccgaaccgctgatggaccacatcccggtgtggaagcgcccgcag
gacggctcgatcatcacgcagttcgactacccgacctgcgagacgctcggcctgctgaag
atggacttcctgggcctgtcgaacctcaccacgatcgacgacgcgctcaagaacatggcg
atcaacggcaaggagccggtcgacctcgacaagctggagctgaccgacaagaagacctac
cagctcctgtcgaagggcgagaccctgggcgtgttccagctggacggcgggcccatgcgg
gacctgctgcggctgatgcgccccgacaacttcgaggacatctcggccgtgggcgcgctc
taccgccccggcccgatgggcgcgaactcgcacacgaactacgcgctgcgcaagaacaag
ctccaggagatcacgccgatccacccgtcgctggcggaggcgctggaggacatcctcggc
acgacctacggcctgatcgtgtaccaggagcaggtcatggcgatcgcgcagaagctggcg
ggctacacgctcggccaggcggacctgctgcgccgcgcgatgggcaagaagaagaaggag
atcctggacaaggagttcgcgggcttcgaggcggggatgctggccaacggctacccggcc
gacgcgatcaagaccctgtgggagatcctcgtcccgttcgccgactacgccttcaacaag
gcgcactcggccgcgtacggcctggtctcgtactggaccgcgtacctgaaggcgaactac
ccggccgagttcatggccgcgctgctcaccacgaactccgacaacaaggacaagtcggcc
atctacctggccgagtgccgccggatgggcatcacggtgctcccgccggacgtcaacgag
tccgagcgcgagttcgtcgcggtcggcgaggacgtccggttcggcctgggcgcgatccgc
aacgtcggcgcgaacgtggtcgacgcgatcatcaaggcgcgcaaggagaagggccgcttc
accgacttctccgacttcctgcgcaaggtcgacgccacggtctgcaacaagaaggtcgtg
gaatcgctgatcaaggcgggcgccttcgactcgctgaaccacccccgcaagggcctgcac
atggtgcacgtcgaggcggtggacgcgatcatgctgaccaagaaggaggaggcgcgcggc
cagttcgacctgttcggcgacggcggggacgacggcaacggcagcgtcttcgacgtgcgc
atccccgaggagcactgggagtccaagcaccagctgaccctggagcgggagatgctgggc
ctgtacgtgtccgggcacccgctcaacggggtcgagcaggtgctggagtcctactcggac
gcctccatcgcgcgcatcctggagggcgacgtcgcggacggcacgcaggtcacgctcggc
ggcatcctcgcgtcggtgaccaggcgggtcaacaagaacggcgagccgtgggcgtcggcg
atgctggaggacctcgccggtggcatcgaggtgctgttcttccccaagagctacgtggtg
cacggcatgtccgtggtcgaggacgcgatcgtgctggtgaaggcgcgcgtcgcgaagcgg
gacgaccgcatctcgctgatcgccaacgacctggtggtgccggacctggcggagctgggc
aaccaggcgctgaggttgaagctgaacgcgtcgcgctgcgacccgaagctggtgacctcg
ctcaaggaggtgctgtcggcacatccggggacgaccgaggtgcacctcaacctggtgatc
aacagcagtcggcagacgctgctgaagctggacgacgcgctgcgggtcaacccgaccccg
tcgctcaagggcgacctgaaggcgctgctcggaccgggctgcctgggctga
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integrated database retrieval system
