Actinosynnema pretiosum: CNX65_29020
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Entry
CNX65_29020 CDS
T05092
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
apre
Actinosynnema pretiosum
Pathway
apre02020
Two-component system
apre02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
apre00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CNX65_29020
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CNX65_29020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apre03021
]
CNX65_29020
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
apre02035
]
CNX65_29020
Transcription machinery [BR:
apre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CNX65_29020
Bacterial motility proteins [BR:
apre02035
]
Flagellar system
Flagellar assembly proteins
Stator
CNX65_29020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ATE58449
UniProt:
A0A290ZHI6
LinkDB
All DBs
Position
complement(6812423..6813181)
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AA seq
252 aa
AA seq
DB search
MIALWHTYGQSREQGLRDRLVLHYAPLVKYVAGRVGTGLPAHVDVADLIQSGIFGLVDAI
EKFEPERGLKFETYAMQRIRGAILDDLRSQDWVPRSVRSRARDVERALERLGGRLQRTPT
DRELAAELKIGLGELRELYAQFQLTSVVALDELIAAGRAAGSAGSSLAESLPDEGAEDPV
ASLVDQDSRRQLADAIAQLAERDRVVVTLYYFENLTLAEIGKVLGVTESRVCQLHTRAVL
RLRTKINEQLET
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atcatcgcgctgtggcacacctacgggcagtcgcgtgagcaggggctgcgggatcggttg
gtgctgcactacgcgccgctggtcaagtacgtcgccgggcgggtcgggaccgggttgccc
gcgcacgtcgacgtcgccgatctgatccagtccgggatcttcgggctggtcgacgccata
gagaagttcgagcccgagcgcggcttgaagttcgagacctacgccatgcagcgcattcgt
ggcgcgatcctggacgacctcagatcgcaggactgggttccccgttctgttcgcagcagg
gctcgggacgtcgagcgggcgctcgagcggctcggtgggcggttgcagcggacgcccacc
gatcgggagctggccgctgagctgaagatcgggctcggggagctgcgggagctgtacgcg
cagttccagctgaccagcgtcgtcgcgctggacgagctgatcgccgcaggtcgggccgcc
gggagcgcggggtcctcgctggcggagtcgttgcccgacgaaggcgccgaggacccggtc
gcctcgctggtcgaccaggacagccgcaggcagctcgccgacgccatcgcgcagctggcc
gagcgggaccgggtcgtggtcacgctgtactacttcgagaacctcacgctggccgagatc
ggcaaggtcctcggggtcaccgagtcccgtgtctgccagctgcacaccagggccgttctc
cggctccgcaccaagatcaacgagcagctcgaaacctga
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