Actinosynnema pretiosum: CNX65_30560
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Entry
CNX65_30560 CDS
T05092
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
apre
Actinosynnema pretiosum
Pathway
apre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CNX65_30560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apre03400
]
CNX65_30560
Enzymes [BR:
apre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CNX65_30560
DNA repair and recombination proteins [BR:
apre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CNX65_30560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
HHH_5
AAA_22
NAT10_TcmA_helicase
P-loop_TraG
nSTAND3
TraI_hel_assoc_N
PIF1
NPHP3_N
HTH_IclR
DEAD
UvrD_C
KOW6_SPT51-2
DUF87
AAA_10
AAA_16
AAA
DAP3
Motif
Other DBs
NCBI-ProteinID:
ATE57100
UniProt:
A0A290ZDI3
LinkDB
All DBs
Position
complement(7139090..7141267)
Genome browser
AA seq
725 aa
AA seq
DB search
MAEGAVLEAVLERITFANEETGYTVARVDAGRGADLITVVGALLGAQPGESIRMRGRWGS
HPQYGKQFHVDDYTTVLPATIQGIRRYLGSGLIKGIGPVLADRIVTHFGVDALDVIEQHP
ERLIEVPKLGPKRTRMIAAAWEEQKAIKEVMVFLQGVGVSTSLAVRVYKQYADRSIDVVR
EEPYRLATDVWGIGFRTADVIAKAVGIPHDSPQRIKAGLQFTLSEATGSGNCFLPENELI
GDAIRILQVDAGLVIDCLAELVDEEGVVREVQPDGEAAVYLIPFHRAEISLATQLRRLLA
ADGDRLPAFASVDWTKAFRWLGAELEGKQEAAVRLALTNKVAVLTGGPGCGKSFTVRSIV
RLALAKGAKVVLAAPTGRAAKRLAELTGHGASTVHRLLELKPGGDAAYDRDRPLDADLVV
VDEASMLDLLLANKLVKAVPPGAHLLLVGDVDQLPSVGAGEVLRDVLATGSPVPNVRLTH
VFRQAQQSGVVTNAHRINAGEPPVVRGMADFFLFPVEDAEEAAELTVDVVARRIPRKFGL
DPRKDVQVLAPMHRGAAGAGGLNAVLQEALTPARDGLPERRFGGRVFRVGDKVTQIRNNY
DKGANGVFNGTLGVVTGIDPVEQRVTVRTDEDEDVDYEFGELDELTHAYAMTIHRSQGSE
YPCVVIPITTSAWMMLQRNLLYTAVTRAKKLVVLVGSRKAIGQAVRTVGAGRRHTALDHR
LTGAL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtggccgagggtgctgtgctggaagccgtgctcgagcggatcaccttcgcgaacgaggag
accgggtacaccgtcgcccgcgtggacgccgggcgtggcgccgacctgatcaccgtcgtc
ggggccctcctcggcgcgcagcccggtgagtccatccggatgcgcgggcgctggggttcg
cacccgcagtacggcaagcagttccacgtcgacgactacaccaccgtcctccccgccacc
atccagggaatccgccgctacctcggctccggcctgatcaagggcatcggccccgtgctc
gccgaccggatcgtcacgcacttcggggtggacgcgctcgacgtcatcgagcagcacccc
gagcgcctcatcgaggtgcccaagctcgggcccaagcggacgaggatgatcgccgccgcg
tgggaggagcagaaggccatcaaggaggtcatggtcttcctccagggtgtcggggtctcg
acctccctcgcggtgcgcgtctacaagcagtacgccgaccgctcgatcgacgtcgtccgc
gaggagccctaccggctcgccaccgacgtgtggggcatcgggttccgcaccgccgacgtc
atcgccaaggccgtcggcatcccgcacgacagcccccagcgcatcaaggcgggcctccag
ttcacgctctccgaggccaccggcagcggcaactgcttcctgcccgagaacgagctcatc
ggcgacgccatccgcatcctccaggtcgacgcgggcctggtcatcgactgcctcgccgag
ctcgtcgacgaggagggggtggtgcgggaggtccagccggacggcgaggccgccgtctac
ctgatccccttccaccgcgccgagatctcactcgccacccagcttcgccgactgctcgcc
gccgacggcgaccgcctccccgcgttcgcctccgtggactggaccaaggccttccgctgg
ctcggagccgagctggagggcaagcaggaagccgccgtgcgcctcgcgctcaccaacaag
gtcgccgtgctcaccggcggacccggctgcggcaagagcttcaccgtgcgctcgatcgtc
cggctcgccctggccaagggcgcgaaggtcgtgctcgccgcccccacggggcgcgccgcg
aagcggctggccgagctgaccggccacggggcgtccaccgtgcaccgcctgctggagctc
aagcccggcggtgacgccgcctacgaccgcgaccggccgctcgacgcggacctggtcgtc
gtggacgaggcgtccatgctggacctgctgctcgccaacaagctcgtcaaggccgtccct
cccggcgcgcacctgctgctggtcggcgacgtcgaccagctgccctcggtgggcgcgggc
gaggtgctgcgggacgtgctggccaccggcagcccggtgccgaacgtgcgcctcacgcac
gtgttccgccaggcccagcagtccggcgtggtcaccaacgcgcaccgcatcaacgcgggc
gaacccccggtggtgcgggggatggcggacttcttcctgttcccggtcgaggacgccgag
gaggcggccgagctgaccgtggacgtggtcgcgcgccgcatcccgcgcaagttcggcctg
gacccgcgcaaggacgtgcaggtcctcgcccccatgcaccggggcgcggcgggcgcgggc
gggctcaacgccgtgctgcaggaggcgctgacccccgcgcgcgatggcctgccggagcgc
aggttcggcgggcgggtgttccgggtcggggacaaggtcacccagatccgcaacaactac
gacaagggcgcgaacggggtcttcaacggcacgctcggggtggtcaccgggatcgacccg
gtggagcagagggtgacggtccggaccgatgaggacgaggacgtggattatgagttcggc
gagctggacgagttgacccacgcctacgccatgacgattcaccgttcacagggcagtgag
tacccgtgcgtggtcatcccaatcacgaccagcgcctggatgatgctccagcggaacctg
ctgtacacggcggtgacccgcgcgaagaagctcgtggtgctggtcggctcgcgcaaggcg
atcgggcaggcggtgcgcacggtgggcgcggggcgccgccacaccgcgctcgaccaccgg
ctcaccggcgcgctctga
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