Actinosynnema pretiosum: CNX65_31325
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Entry
CNX65_31325 CDS
T05092
Name
(GenBank) RNA polymerase subunit sigma
Organism
apre
Actinosynnema pretiosum
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Paralog
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
PhyR_sigma-like
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
ATE57230
UniProt:
A0A290ZDV7
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Position
7319620..7322211
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AA seq
863 aa
AA seq
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MATVPADVPRPGDAELIESVRGGDVAAYGQLYERHVTAAYNLARQLARSSAEADDLVSEA
FSKVLDVLRGGGGPDVAFRAYLLTALRHNAYDKTRRDRKVELSEDVSEVAPEAVSVPFRD
TAVAGLERSLAARAFARLPERWQTVLWHTEVEGQSPAEVAPLLGMTANGVSALAYRAREG
LKQAYLQVHLAETQAVRCRATVDRLGAWTRAGLSKRETTQVEAHLDECSDCRRLAAELAD
VNGALRAAIAPIVLGAGTAGYLISSRNSASPAATAAAGGIAGNALADALGGATAQAAEGA
AGAAGSAGAAGGRSAGASGAAGIAGEVVRAALSGGPRQLLGLAASAAALIVVVVVAIAAP
GAGSGPDVAQSPAAEQSSGTPASPGAPVPPTSGEADPAPSEVPPSGAPADGDEAPGAVLP
PAGTGNGPVSTRDNPPPPPPAGDPTTDPDPTTDPDPTTGPTTPKPPDPPDPPKPPLPASL
TATWPDDYSLTPGQDPKPLEVVVANSGEVLSEIPVLALTLPQGVRPVSLSRLAAADADDL
VECGPVDGPFTCPALRGVDPKGKTSFRLLLVADRTAQGGEITGTLNAGAAVTVKLNVPVK
VLPEPDQVALEVHKREYPRWGHSELDITAVNAGSRGAELELTARAGENVWLKWSRKREAC
RGDETGLECRTDVRSGGKFRIAVSAYAVRAENPASEEPEPGQEPAAADGRRGKHRPWVWG
QVTVTARIGSASQTVAVMVRVWEYDRGPQHPPSSSTTPPTTTTTSTPPPTTTTTTPPTTT
TTTTRPSPPSSTPPSSPPWTPPKTPPPGHTRPTDPPLRQEPASTPPAPVPQEQQAEVVVE
LPVCTTGEPPVLDEVVTVCRVAT
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaccgttcctgctgatgtcccgagaccgggggacgcggaactgatcgagtcggtg
cgcgggggtgatgtcgccgcgtacggacagctgtacgagcgccacgtcaccgccgcctac
aacctggcccggcagttggcgcgctcctcggcggaggccgacgacttagtctccgaggcg
ttctcgaaggtgctcgacgtgctgcggggcggcggtggccccgacgtggcgttccgcgcc
tacctgctgaccgcgctgcggcacaacgcctacgacaagacccggcgggaccggaaggtc
gagctgtccgaggacgtgtccgaggtcgcccccgaggcggtcagcgtgccgttccgggac
acggccgtcgcggggctggagcgctcgctcgccgcgcgcgccttcgcccggctgcccgag
cgctggcagaccgtgctgtggcacaccgaggtcgagggccagtcgcccgccgaggtcgcc
cccctgctggggatgacggccaacggcgtgtcggcgctggcctaccgggcccgcgagggc
ctcaagcaggcctacctccaggtgcacctggccgagacgcaggccgtgcgctgccgggcg
accgtggaccggctgggcgcgtggacccgcgcgggcctgtcgaagcgggagaccacgcag
gtcgaggcgcacctggacgagtgctcggactgccgcaggctggccgccgagctggcggac
gtcaacggggcgctgcgcgccgccatcgcgccgatcgtgctgggcgcgggcaccgccggt
tacctgatctcctcgcgcaactcggcctccccggcggccacggccgccgcgggcggcatc
gcgggcaacgcgctggccgacgcgctcggcggggccaccgcccaggccgccgagggtgcg
gctggcgccgcaggctcggcaggcgcagcgggtggacgctcggcgggcgcctcgggcgcg
gccgggatcgcgggcgaggtcgtgcgggcggcgctgagcggcggcccgcgccagctgctc
gggctggccgcgtccgccgccgcgctgatcgtcgtggtcgtcgtggccatcgccgcgccg
ggcgccggttcgggccccgacgtcgcgcagtcccccgccgccgagcagagcagcggcacc
ccggcctcccccggcgcaccggtcccgcccacctcgggcgaggcggatcccgcgccgtcc
gaggtccccccgtccggcgcgcccgccgacggggacgaggcgcccggcgcggtcctgccc
ccggcgggcacgggcaacgggccggtcagcacccgggacaacccgccaccgcccccgccc
gccggggaccccacgaccgacccggacccgacgaccgacccggacccgacgacgggtccc
accaccccgaagcccccggacccgcccgacccgccgaagccgccgctcccggcgtcgctg
acggcgacctggcccgacgactactcgctcacccccggccaggacccgaagcccctcgag
gtcgtggtcgccaactccggcgaggtgctctccgagatcccggtgctggcgctgaccctg
ccccagggcgtgcgcccggtcagcctgtcccggctggcggcggcggacgccgacgacctg
gtggagtgcggaccggtggacggcccgttcacctgcccggcgctccggggcgtcgacccg
aagggcaagacctcgttccggctgctcctggtggccgaccgcaccgcgcagggcggcgag
atcaccgggacgctcaacgcgggcgccgccgtcacggtcaagctgaacgtgccggtcaag
gtcctgcccgagccggaccaggtggcgctggaggtgcacaagcgcgagtacccgcgctgg
gggcactccgagctggacatcaccgccgtcaacgccgggagccgcggcgccgagctggag
ctgaccgcacgggccggggagaacgtgtggctcaagtggagcaggaagcgcgaggcctgc
cggggtgacgagaccgggctggagtgccggaccgacgtgcgctccggcgggaagttccgg
atcgcggtgagcgcgtacgcggtgcgggcggagaacccggcctcggaggaaccggaaccg
ggtcaggagcccgctgccgccgacggcaggcgggggaagcaccggccctgggtctggggc
caggtgaccgtgacggcccggatcgggagcgcgtcgcagaccgtcgcggtgatggtgcgg
gtctgggagtacgaccgcggcccgcagcacccgccgtcgagcagcaccacgccgccgacg
accacgaccacgagcaccccgccgcccaccaccacgacgaccacgccgcccacgacgacg
accacgaccaccaggccgagcccgccgtcgagcacgcccccgagcagcccgccgtggacg
ccgccgaagaccccgccgccgggccacacccggccgaccgacccgccgctgcggcaggag
cccgcctccacgccgcccgccccggtcccgcaggagcagcaggccgaggtggtggtcgag
ctgccggtgtgcacgaccggtgagccgccggtgctggacgaggtggtgaccgtctgccgg
gtcgccacctga
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