Ahaetulla prasina (Asian vine snake): 131184037
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Entry
131184037 CDS
T09329
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131184037 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apri03021
]
131184037 (SF3B3)
03041 Spliceosome [BR:
apri03041
]
131184037 (SF3B3)
03036 Chromosome and associated proteins [BR:
apri03036
]
131184037 (SF3B3)
Transcription machinery [BR:
apri03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
131184037 (SF3B3)
Spliceosome [BR:
apri03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
131184037 (SF3B3)
Complex B
131184037 (SF3B3)
Complex C
U2 SnRNP specific factors
131184037 (SF3B3)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
131184037 (SF3B3)
TFTC complex
131184037 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Motif
Other DBs
NCBI-GeneID:
131184037
NCBI-ProteinID:
XP_058010920
LinkDB
All DBs
Position
12:complement(25961067..26022374)
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AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILSCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGERSSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESSNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVVRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFANTG
DDWHVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANSICGIQTVGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTHPRWVTTACLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacttaactcttcaacgggccactggcatcagctatgccatccacggg
aatttttcaggtactaaacagcaagaaattgttgtttcccgagggaaaatcttggaattg
cttcgtcctgatccaaacactggaaaggttcataccttgttgacagtagaagtttttggc
atcattcgctcgctcatggccttcagattaactggtgggaccaaggactacattgtggtg
ggcagtgattcaggccgcatcgtcatcctggaataccagccttctaaaaacgtgtttgag
aaaattcatcaggaaacctttggcaagagcggctgccgcagaattgttcctggacagtac
ttggctgtggatcctaaagggcgggctgtcatgatcagtgccattgagaagcagaaactt
gtgtacattctgaacagagacgcagctgctcggctcaccatttcttctccgttggaagcc
cacaaggccaacaccttggtttatcatgtggttggagtcgacgttgggtttgaaaatccc
atgtttgcttgcctggaaatggattacgaggaagctgacaatgaccccactggggaagct
gcagcaaacacccagcagacattgacattttatgagttagacttgggcttgaaccacgtg
gtcaggaaatacagcgaaccgttggaagaacacggcaattttctaataacagttcctgga
ggctccgatggtccgagtggggtattgatttgctctgaaaactacatcacctacaaaaac
tttggtgaccagccagatattcgatgtccaattcccaggaggaggaatgacttggatgac
cctgaaagaggcatgatctttgtctgctctgctacccacaagaccaagtctatgtttttt
ttcttagctcaaacagagcagggtgatatttttaaaatcaccttggagactgatgaggat
atggtcacagaaattcgcctgaagtattttgacactgttcctgtggctgcagccatgtgt
gtgctgaaaacgggctttctttttgtggcttctgagtttggaaaccactatctctaccag
attgcccaccttggagatgatgacgatgagcccgagttctcctctgcaatgcccctggag
gagggggacaccttcttcttccagccccggcctcttaaaaacctggtattggtggatgag
ctggacagtctctctccgattttgtcttgccagattgctgatcttgcaaacgaagatacc
cctcagctgtatgtggcatgcggaagggggcctcgttcgtctctgagggtcctgagacac
ggccttgaggtatctgaaatggccgtctcggagttgcccggtaatcctaatgctgtgtgg
acagtgaggagacacattgaagatgagtttgatgcctacatcattgtctctttcgtcaat
gccaccctagtcctgtctattggagaaactgtggaggaagtgactgactcagggttcctt
ggtaccacgcccaccttgtcctgctcactgctgggagatgatgctttggtgcaggtttat
cctgatggcatcaggcacataagagcggataaacgagttaatgaatggaaaacacctggg
aaaaaaacgattgtcaaatgtgccgtgaatcagagacaagtggtgatcgcgcttactgga
ggagagctggtttacttcgagatggatccatctgggcagctgaatgaatacacggaaagg
aaggagatgtcggccgatgttgtgtgcatgagtttggcgaacgttccacctggagagcag
cgctcccgtttccttgcggttgggctggtagacaacactgtacggatcatttcccttgat
ccctcagactgtctgcagcctctgagcatgcaggctctccctgcacagccagaatccttg
tgcatcgtggaaatgggtggtgctgagaagcaagatgagctgggagaacggagctccatt
gggtttttgtacctgaacattggcttacagaatggtgtgctcctccgaactgtccttgac
cctgtcaccggtgatctatctgacacaaggaccaggtacctcgggtcccgccctgtgaag
ctgttcagagtccggatgcaaggccaggaagcggtgctggcgatgtccagccgctcttgg
ctgagctactcctaccagtcccgcttccacctcacccccctctcctacgagaccctggag
tttgcctctggcttcgcctcagagcagtgcccggaggggattgtcgccatttccaccaac
accctgaggattttggcactggagaagcttggcgcagtctttaaccaagttgccttccca
ttgcaatacacaccccgcaagtttgtgatccacccagagagcagcaatctgatcatcatc
gagactgaccacaatgcttacaccgaggcgaccaaagcccagcggaagcagcagatggcc
gaggaaatggtggaagctgcaggggaagatgagagggaacttgctgcagagatggctgct
gctttcctgaatgagaaccttccggagtccatttttggggctcccaaagcaggaaacgga
cagtgggcctcggtggtcagggtgatgaaccccatccagggaaacactttggaccttgtg
cagctggagcagaacgaggctgcattcagtgtggctgtgtgccgctttgccaacacgggt
gatgactggcatgtcttggtgggtgtggccaaagacctcattctgaacccgcgttcggtt
gccggagggtttgtctacacttacaagctggtgaataatggtgagaagcttgagttcctg
cacaagacaccggtggaggaggtacccgcggctattgcccccttccaagggagggtgctg
attggcgtggggaagctgctgcgagtctacgatttgggcaagaagaagctgctccggaag
tgtgagaataagcacattgccaactccatctgtgggattcagacagtggggcacagagtg
attgtgtctgatgtccaggaaagcttcatctgggttcgatacaagagaaatgaaaaccag
ctgatcatttttgcagacgacacccacccccgctgggtcaccactgcctgcctcctggac
tatgacacggtggctggagctgacaagtttggcaacatctgtgtggtgaggctgccgccc
aacacaaatgacgaggtcgatgaggatccaaccggcaacaaggctctgtgggataggggc
ctcctcaatggtgcatcccaaaaagctgaggtgatcatgaactaccacgtaggagaaacc
gtgctgtctctgcagaagacgaccctcatccccggaggttctgagtcgcttgtttataca
accttgtctggaggcattggcatcctggttccatttacatcacatgaggatcatgacttc
ttccagcatgttgagatgcacctccgctctgagcacccgcctctttgtggtcgagaccac
ctcagcttccgctcctattacttccctgttaagaatgttattgatggggacctctgtgaa
cagttcaactccatggagcccaacaagcagaagaacgtgtctgaagaactggaccggact
ccaccagaagtctcaaagaaactagaggacatccgtacgcgctatgctttctga
DBGET
integrated database retrieval system
