Ahaetulla prasina (Asian vine snake): 131184087
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Entry
131184087 CDS
T09329
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131184087 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131184087 (CNOT1)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131184087 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
131184087 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
131184087
NCBI-ProteinID:
XP_058011018
LinkDB
All DBs
Position
12:complement(25283806..25412608)
Genome browser
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIENPLHYQKSLKPSPHLFTQLSKVIK
LSKVQEVIFGLALLNSFNPDLQVFAAQFVKQKLPDLLRSYIDADVSGSQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIEAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCTSVEECRSIITQFGVGEVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGRDKNDGTQTHTWNVEVLIDVLKELNPTLNFKEVTYE
LDHPGFQIRDSKGLQIVVFGVQRGLGLEVFPVDLIYRPWKHAEGQLSFIQYSLINPEIFC
FADYPCHTVSTEILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVVNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAAGMAS
LSLGGPTVPHTQSVPGFPPNLSSAFSTPQSPAKAFPPLSTQNQNTPFSGIGGLSSQLPVG
GLTTGSLGIGTGNLGLPAVNNDPFVPRKLNTSGLNQPTFQQSKVKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFTSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQAPTKTPLTGQVSTVVTTTTSSSTVAKTAIAPVGRVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINDLKPGSLLKDKDRLKNLDEQLSAPK
KDIKQVEELPPITTTTTSTTSATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRVA
AHHMMRNLTAGMAMITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDSSQPTGILAQPMKQAWATDDVAQIYDKCMAELE
QHLQSVPHTLAMNPQTQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHMTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELGEREMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELAKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
actaagaaaaactaccgagccagccagcaggaaatacaacatattgtgaaccggcacgga
cctgaagcagacaggcatttgctacgctgtctcttttctcatgtggattttagtggcgat
ggtaaaagtagcgggaaagatttccaccagactcagtttctgatccaggagtgtgcatca
ttgattacaaagccaaacttcatttcaacactgtcctatgctattgaaaatccattgcat
tatcaaaagagtcttaagccatcaccccatctattcacccagctgagcaaagtaatcaaa
ttaagcaaagttcaagaggttatttttggtcttgctttgttgaactctttcaatcctgat
ctacaagtttttgctgctcagtttgttaaacagaagcttcctgatcttctgcgctcatat
attgacgcagacgtcagtggcagtcaagaaggtggcttccaagatattgcaatagaagtc
ttgcacctccttctttcccatcttctttttgggcagaagggagcatttggggttggacag
gaacaaattgaggctttcctcaaaacattgcgcagagatttccctcaagaacgttgccct
gtggtgcttgcaccactcctataccctgaaaaacgggacattctaatggacaggatcctg
cctgactctggagggatagcaaaaaccatgatggagagttctcttgcagacttcatgcag
gaagtcggctatggcttttgtacaagcgtggaagaatgtcgcagtatcatcacacagttt
ggtgttggggaggttacagctgcccaggttgccagggttttgggaatgatggctcggaca
cactctggattgacagatggcattccattacagtctatttctgcccctggaagtggaatt
tggagtgatggaagagataaaaatgatggaacacagactcatacatggaatgttgaagtt
ttgattgatgtgcttaaagaactgaacccaaccttaaacttcaaggaagtaacctatgag
ctggaccaccctggatttcaaattcgtgatagcaagggcctgcaaattgtagtctttgga
gttcagcgaggattaggactggaggtttttccagttgatctaatatacagaccttggaaa
catgcggaaggccagctctcattcattcagtattccctcattaacccagagatcttctgt
tttgctgactatccctgtcacactgtttccacggagatcttgaaagcaccacctgaggat
gataatcgagaaattgccacatggaagagcctagatttgattgaatccctgttgcggttg
gcagaggtgggccagtatgaacaagtcaagcagctcttcagttttcctatcaagcactgt
ccagatatgttggtcttggctttgctacagatcaacacttcttggcatactttgcggcat
gaactcatctccacacttatgcccattttccttggcaaccacccaaattctgctatcatc
ttgcattatgcatggcacgggcagggtcagtccccctcaattcgtcagctcatcatgcat
gccatggcagaatggtacatgagaggagaacaatatgaccaagcaaaattatcacgtatt
ctagatgtggcccaagacttgaaggcattgtctatgctgctgaatggtactccatttgcc
tttgttattgaccttgctgcccttgcctctcggcgggaatacctcaaactagacaaatgg
ctcacagataaaattcgggagcacggggagcccttcatccaagcttgtatgactttcttg
aagagaagatgtccctctatcttgggtggtcttgctccagagaaagaccagcccaaaagt
gctcaacttccaccagagacactagcaacaatgctagcttgccttcaggcttgtgctgga
agtgtatcgcaagagctgtcggaaactattctcaccatggtagccaactgcagcaatgta
gtgaacaaagccagacagccaccgcctggtgtgatgcccaaaggacgtccccccagtgct
agcagcctggatgccatctcccctgtgcagattgatccacttgctgctgggatggcatct
ctcagtttaggtggcccaacggttcctcatacccagagtgtgcctggatttcctccaaac
ttgagttctgcttttagtactccgcagtcaccagcaaaagcatttccaccgctttctaca
caaaaccagaacacaccttttagtgggattggtggactctcttcgcaacttccagtaggt
ggtctcacaacaggtagtctgggtattggaactgggaaccttggcctccctgcagtgaat
aatgatccatttgtgccaagaaagctgaacacatcaggactgaaccagcccacattccag
cagagtaaggtgaaaccttctgacttatctcaggtatggccagaggctaatcagcacttt
agcaaagagattgatgatgaagccaacagctattttcagcgtatttataatcacccaccc
catcccaccatgtctgtagatgaggtgttagaaatgctacagagatttaaggactctaac
attaaacgggagcgagaagtatttaactgtatgctgaggaatttatttgaagaatatcgt
tttttcccacaatatcccgataaagagctccacataacagcctgtctctttggtgggata
atcgagaagggattggtgacctatatggccctgggcctggccctgcgctatgtgcttgaa
gccttacgaaagccttttacatccaaaatgtactattttggaattgctgcactagataga
tttaaaaatagattgaaggactaccctcagtattgtcagcacctggcttctattagtcac
tttatacagttccctcatcacctgcaggagtacattgaatatggacagcaatcaagagat
cctcctgtgaagatgcaggggtccatcaccacccctggaagtattgccctggcccaggcc
caggcccaggcccaggctccaacaaagactcctctcaccgggcaggttagcactgtagtc
accaccaccaccagcagcagcactgtggcaaagacagccattgcacctgtgggtcgagtc
agcttcaagaaagatgtgccaccttctattaatacaaccaatattgatactctgctagtg
gccactgatcaaacagagagaattgtagaacctcctgaaaatgttcaggaaaagattgct
tttatctttaataatttgtctcaatccaacatgactcagaaggttgaggaactgaaggaa
acggtgaaagaagaattcatgccttgggtttcacaatatctcgtgatgaagagagttagc
attgagccaaacttccatagtctttattcaaatttccttgacactcttaaaaatccagaa
tttaataaaatggttttgaatgaaacatacagaaatatcaaggtgttgcttacatcggat
aaagctgctgccaacttctcagaccgttcattgctgaagaacctgggccactggctgggg
atgataacactggcaaagaataagcccatcttgcacacggacttggatgtcaaatctttg
ctgctagaagcttatgtaaaaggacagcaggaattgctgtatgttgtgccatttgttgct
aaagtattggaatccagtgtaagaagtgtggttttcaggcccccaaatccatggaccatg
gcaatcatgaatgttcttgcagagcttcatcaggaacatgacttaaagctgaatctgaag
tttgaaattgaagtgctctgcaaaaacctggcccttgacatcaatgatctaaaacctggt
agtctcctaaaagataaggaccggttgaaaaacctggatgaacagttatctgctccaaag
aaggatataaaacaagtagaagaactaccacccattactactaccactacttccacaact
tcagctaccagcaccacatgcacagctactgttcctccacagccacagtacagttaccat
gatatcaacgtatactccctgggaggactagctccacacattactctaaacccaactatt
cccttgttccaagcccatccacagttaaagcagtgtgtgcgccaagccatagagcgtgca
gttcaagaactggttcatccagtagtggatcgttcaattaaaattgccatgactacttgt
gaacagatagtgaggaaggattttgcgctggactcagaagagtcgcgcatgcgtgtggca
gcacatcacatgatgcggaacctgacggctgggatggctatgattacctgcagggagccc
ttgctgatgagcattgcgaccaacctgaagaacagctttgccactgcattgcgggcagct
tcaccacagcagagggagatgatggagcaggctgcagcccagttggctcaagataactgt
gagttggcctgctgcttcattcagaaaacagcagtggaaaaagcaggtcctgaaatggac
aagaggctggcaactgaatttgagctccgaaaacatgcccggcaagagggccgcaggtat
tgtgatcctgtagttttgacataccaggctgagcggatgccagaacagatcagactgaag
gttggtggtgtggacccaaaacagctagctgtatatgaagaatttgcacggaatgttcct
ggtttcctgccaacaaatgattcaagtcaaccaacaggaatcctggcccaacctatgaag
caagcctgggcaactgatgatgtggcacagatctatgataaatgcatggcagagctggag
cagcaccttcagtctgttccccacactctggccatgaatccccagacacaagctctgcgg
agccttttggaggctgtcgttgtggctcgtaattctcgagatgctattgcagcccttgga
ttgctacagaaggcggttgaaggattattagatgccacaagtggtgcagatgcagacctc
ctcctccggtaccgcgaatgtcatttgcttgtattaaaagccctgcaagatggccgtgcc
tatggctctccctggtgtaacaagcagataacaagatgtctgattgagtgtcgagatgaa
tataaatacaacgtagaagcagtggagctcttgattcgtaaccatctagttaacatgcag
cagtacgaccttcacctggctcagtccatggagaacggcttgaactacatggcagtggcg
tttgcaatgcagctggtgaagatcctgctggtggatgagagaagtgtggctcacatgaca
gaagcagatttgttccataccattgaaactctgatgaggataaatgctcactccagagga
aatgctccagaagggttgccacagttgatggaagtggtgcggtccaactatgaagccatg
attgatcgtgctcatggcggacccaactttatgatgcattcagggatctctcaagcctca
gaatatgatgatcctccaggcctgagggagaaggcagagtatctcctgagagagtgggtg
aatctttaccattctgcagccgctggccgggacagcaccaaagccttctctgcatttgtt
ggacaggtagaacttggggaaagagagatgcatcaacaaggaatcctgaaaactgatgac
ttgatcacaagattcttccgtctttgcactgaaatgtgtgttgaaatcagctatcgtgct
caagctgagcagcagcacaaccctgctgcaaaccccactatgatccgtgccaagtgctat
cacaacctggatgcctttgtgcgccttattgcactgttggtgaagcactctggagaggct
accaacacagtcacaaaaatcaacctacttaataaggttcttgggatagtggtaggagtc
cttttgcaggatcatgatgttcgtcagagtgaatttcagcagcttccctaccaccgcatt
ttcatcatgttactgttagaattaaatgctcctgaacatgtcctggaaactatcaacttt
cagaccctcacagctttctgcaatacatttcacatcctgcgacctacaaaagctccaggt
tttgtttatgcttggttagaactgatctcccatcggatatttattgcaaggatgctggca
catacaccacagcagaagggttggcccatgtatgcacaactcttgattgacctgtttaaa
tatttggctcctttcctgagaaatgtggaacttgccaagcctatgcaaattttgtacaag
ggaacattgcgtgtgttactggtattattacatgatttcccagaattcctttgtgattac
cactatggattttgtgatgtgattcctccaaactgtattcagctaaggaatctgattttg
agtgcctttccacgtaatatgaggcttcctgaccccttcactcccaaccttaaggttgac
atgctgagcgagatcaatattgctccacggatcctcaccaattttactggtgttatgcca
cctcagttcaagaaggatttggattcctatctcaaaactcgttcgccagtcacgttcctc
tctgacttgcgcagcaacttgcaggtatcaaatgagcctggcaatcgttacaatattcag
ctgatcaatgccttggtgctttatgtcggtacacaagcgattgcacacattcataataag
ggcagcacaccgtccatgagcaccatcactcattcagcccacatggacatcttccagaac
cttgctgttgatctggatacagaaggtcggtaccttttcctgaatgcgattgccaatcag
ttgcggtatcccaacagccacacacactacttcagctgcaccatgctttacttgtttgca
gaagccaatacagaagctattcaagagcagatcaccagggttttgttagaacgactgatt
gtaaataggcctcatccctggggcctcttaatcaccttcattgaattgattaaaaatccc
gcatttaaattctggaaccatgagtttgttcactgtgctccagaaattgaaaagctgttc
cagtcagttgcacagtgttgtatggggcagaaacaggcacagcaagtaatggaaggaact
ggagccagctag
DBGET
integrated database retrieval system
