Ahaetulla prasina (Asian vine snake): 131184244
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Entry
131184244 CDS
T09329
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apri03036
]
131184244 (TDRD12)
Enzymes [BR:
apri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
131184244 (TDRD12)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Gene silencing
piRNA pathway
131184244 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Urotensin_II
Motif
Other DBs
NCBI-GeneID:
131184244
NCBI-ProteinID:
XP_058011315
LinkDB
All DBs
Position
12:12285439..12320917
Genome browser
AA seq
1295 aa
AA seq
DB search
MIEVIILKIENPDCFWVYIIGGRKFVDNETEYETLQTEMNQFYNKHYQCVDAKPYALEEG
QVCAVYCEELKSWCRAVVNSIISYTDYYIAECFLVDYAKTVPVDTKKICVVVKSFMRLPY
RATKFRLYCVKPVTLRVNYYNDNAEIVPANKWDVAAVQYFQNLLNAATQVEAKLYAVEED
NFAVYLYVTINGEKVCVNDDLVAKNFAYYELGKANRKRGSEGAKSLSEKNPVMLLWPTLL
RETMVSEMDEYEQSVPQGIGAAPICGNSDKAEFTHFPETNLDKTKQPDIVVPVSPLKQGI
TFSVPTEMQTVSNLPKTSTKIQEGENDLQENNLGVKLLQFLNPDPLKIATGQETEELKLN
ITTCLPVVLSNKIEPCSSLETAPLFPALKKELLRKQFQGPNHVQSYSWPAIARGYDSLII
SSESNPLSYLLPIITFLQSRNCYISLSARHGPVALIICPGRKKAELVFELLKTYSHCSRP
LHPVLLFLGMNKEEIKNVRIPRGCEIVVTTPPSFLRLLEHHSLLFLRLCHLVFDEVDVLF
SDTKEQILAILQYYKSNLSVEEKEFAPQQIVAVGNHWDKNVEVLTKEFMNDPYIVITSME
EAAIYGKVQQVVQLCLECDRISTLLQTLDFTPTDAQKTLIFTSSVEERDMVYKAVESISL
FCLKMSPGIGFHSDYIVEQWNKTISPGTHVVLVLTDDCTAAVKFTDATRVIHFSFPPTPR
VFGARLHGLSANFQNSVEKSPSLGKEQNKAKSILLLTEKNACHAVGVLHYLKRAEAFIPP
DLYNFTRGVLEAKEEKRSRQPLCPSIKAFGTCKNKKRCPDRHRINLQIDVPSKVIDEALQ
TGGIITILPLFIVDATNYLGRVVGKWGNPYAALETALRDYYRESNNCTPVDKVKKLAVYG
LREENSFHRVQVLDEQKEDPGAFYIVHIKYIDEGRTGYVQKHHLLNLPEQFQTLPPQAVE
FILCRVKPIDNEAEWDPKVSRYINDKIRGKPHKAKIALVLGNTIWVDPVIRVTKLQDLKT
SINEYNVRSEILSTGLGVDNPEHIQELEKLFNEAEIPHEKKEKLTLLHPPMDGRKEKAEP
VEQNVSDPATLSSEASDEQALPVVQKLQHSQDTIHDGYSEVPLENHCNEMVQNKNNEDVL
QTSPKCFHPAIKWFDKQDAVVVKIKLQNISNYDCKIFEQRITFSALANGKFYLADMELQR
SILREESTCVLQGNEPTILLVKVKKEPWCNLLKEKNHHVSFDFDYLDDNEERSPFRVGSS
PKKVYEIPTGVCEEEEEEEGESSKDSDSESDLSSC
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagtcataatactgaagattgaaaatccagattgcttttgggtctacataata
ggaggcagaaaatttgtagacaatgaaacggaatatgaaacacttcagactgaaatgaat
caattctataacaaacattatcagtgtgtggatgccaagccctatgcactagaagaggga
caggtttgtgctgtttactgtgaggaactgaaatcttggtgcagagctgttgttaattca
atcatatcgtatacggattattacattgcagaatgtttccttgtggactatgccaaaact
gttcctgtggacactaaaaagatctgtgtggtcgtaaaatcattcatgagactgccttat
agagctacaaagtttaggttgtactgtgtcaaaccagttacactacgtgtcaactattac
aacgacaatgcagagatagtgcctgctaacaaatgggatgttgcagctgtccagtacttc
cagaacctcctgaatgcagccactcaagtggaggccaagttatatgcagttgaagaggat
aattttgctgtctatctttatgtcacaataaatggtgaaaaggtctgtgtgaacgatgat
ctcgttgcaaagaactttgcttactatgaactcggtaaagcaaaccggaaacgaggttca
gaaggtgccaaatctctttccgagaagaatcctgtaatgctgctgtggccaacgttactg
cgagaaactatggtttctgagatggatgagtatgagcaatcggtccctcaaggaataggt
gctgctcctatttgtggtaattctgacaaagcagaatttacacatttcccagaaactaac
ttagataaaacaaaacagcctgatatagtggtgcctgtttcacctttgaagcaaggaata
actttttctgtaccaacagaaatgcaaacagtcagcaacttgcctaagacaagtaccaaa
atccaggaaggagagaatgatctgcaggagaacaaccttggggtgaagcttctacagttt
ttaaaccctgatcctctgaaaattgccacgggacaagaaactgaggagcttaaactgaat
atcactacatgtcttcctgttgtgctgagtaataaaattgaaccatgttcatctcttgaa
accgcaccactgtttccagctttaaaaaaggagcttttaagaaagcaattccaaggacct
aatcatgtacagtcttattcctggcctgcaatagcacgtggatacgattcgcttattatc
tcttctgaaagtaacccactttcatatcttctgccaatcattacatttttgcagtcaaga
aattgctacatatcgttatcagctagacatggtccagtagcattaatcatatgccctggc
cggaagaaagcagaactggtatttgagctcctgaaaacgtacagccattgctccaggcct
cttcacccagtgttgcttttcttgggaatgaataaggaagaaatcaagaatgtaagaatt
ccaagaggatgtgaaatcgtggtaacaaccccacctagctttctgcggctgcttgagcat
catagtttactcttccttcggttgtgtcatctggtgtttgatgaggttgatgtattattc
tctgataccaaggagcagatacttgctattttacaatactacaaatctaacttgagcgtt
gaagaaaaggaatttgcacctcagcagatagttgctgttgggaaccactgggacaaaaac
gtagaagttttaaccaaagaattcatgaatgatccatatattgtaatcacctccatggaa
gaagctgccatatatgggaaagtgcaacaggttgtccagctctgccttgagtgtgaccga
atctctactttgcttcagacattagattttacccctacagatgctcaaaagactctgatt
tttacaagttctgtggaagagagagacatggtatacaaggcagtagaaagcatttcactc
ttttgcttgaaaatgagcccgggaattggatttcattctgattatattgtagaacagtgg
aacaaaacaatcagtcctggcacccatgttgtattggttttaacagatgactgcacggca
gctgtaaaatttacagacgcaacccgtgtcattcatttcagttttccaccaactccaaga
gtctttggtgcccgcctacacggcctgtctgccaacttccagaattcagtagaaaagagt
ccatccctgggaaaagaacagaacaaagccaaatccatcttgctgttgacggagaaaaat
gcctgccatgcagttggagtgttgcattatttgaaacgggcagaagcgttcatcccccct
gacctgtacaactttaccaggggagtgttggaagccaaagaggaaaagagaagcaggcag
ccgttgtgtccttccattaaggcctttggaacatgcaaaaataaaaaacgctgtccagat
cgccatcgcattaaccttcaaattgatgtgccctcaaaagtaattgacgaagctctgcaa
acaggtggaatcataacaatactgcctctttttattgtggatgccacaaactacttaggc
cgtgtggtagggaaatggggtaatccctacgcagctcttgaaacagcgctaagggattat
tatcgggaatctaataattgtaccccagttgacaaggtgaagaagctggcagtgtatgga
ctgcgggaagaaaattctttccacagggtccaagtgctagatgaacaaaaagaagacccc
ggggcgttttacatcgtccacatcaagtacatagacgaaggcagaactggctatgttcaa
aagcatcacttgcttaatttaccggaacagtttcaaacgttacctccgcaggctgtggaa
ttcatactttgtagggttaaacccattgataatgaagcagaatgggatccaaaagtatct
agatacattaatgacaaaatcagagggaaaccacacaaagcaaaaatagcacttgtcctg
ggaaatacaatttgggtagacccagtgattcgagtcactaaacttcaagacctgaaaact
tcaatcaacgaatacaatgttcgctctgaaatcctatctactggattgggagtagacaat
cctgagcatatacaggaacttgagaaattatttaatgaggctgaaataccccatgagaaa
aaagagaagcttacattactacatccccccatggatggaagaaaggagaaagctgaaccc
gttgagcagaacgtctccgatcctgcaactcttagctcagaggcctcagacgaacaggcc
ctgcctgttgtacagaaattgcagcacagccaagataccatccatgatggctattctgaa
gtacctttagaaaatcattgcaatgaaatggtgcaaaataagaacaacgaagatgttctg
cagacttcgcctaaatgcttccatccagcgataaaatggtttgacaagcaggatgctgtt
gttgtgaagataaaattgcaaaacattagtaattacgactgcaagatttttgaacagagg
atcacattcagcgctttggcaaacggcaaattttatttggccgacatggagctgcagagg
agcatcctcagagaggaatcaacttgcgtacttcagggcaatgaacccaccattctcctt
gtaaaagtgaagaaggaaccttggtgcaacttgctaaaagagaaaaaccatcatgtatct
tttgacttcgattacttggatgataatgaggaaagaagccccttccgtgtaggatcaagt
cctaagaaagtgtacgagattcctacaggggtgtgcgaagaggaagaagaggaggaaggc
gaatcttcaaaagatagtgattcagagagtgatttatcctcttgttaa
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