Ahaetulla prasina (Asian vine snake): 131184741
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Entry
131184741 CDS
T09329
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apri03009
]
131184741 (IGHMBP2)
03012 Translation factors [BR:
apri03012
]
131184741 (IGHMBP2)
Enzymes [BR:
apri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
131184741 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
131184741 (IGHMBP2)
Ribosome biogenesis [BR:
apri03009
]
Eukaryotic type
Other ribosome biogenesis factors
131184741 (IGHMBP2)
Translation factors [BR:
apri03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
131184741 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
Helicase_RecD
ResIII
Viral_helicase1
zf-AN1
UvrD-helicase
nSTAND3
AAA_22
DEAD
AAA_16
SLFN-g3_helicase
Flavi_DEAD
IstB_IS21
AAA
AAA_25
PhoH
DnaB_C
NTPase_1
DAP3
ABC_tran
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
131184741
NCBI-ProteinID:
XP_058012431
LinkDB
All DBs
Position
1:complement(259114025..259195207)
Genome browser
AA seq
982 aa
AA seq
DB search
MAASVEEFVSRQMELLKEEREAEISEARAWQEGISLKELQRRGVCLLKLELHCQKTGLYG
HLLVTLQPQKRGLDTELPSNSFGPGDIVGLYEAAGQNNQVCTGIVTRTASNSITIAVDEP
QSNLVSLDQENLYRLLKLANDVTYNRLKRALSTLNHYGSGPASDLIDVLLCSSEPSGASD
TKLLKFYDESLDASQKEAVCFSLAQKELAIIHGPPGTGKTTTVVEIILQAVEQGLKVLCC
APSNIAVDNLVERLSEHKVRILRLGRPARLLESIQHHSLDAVLLRGDNAQIVADIRKDID
QAFMKTRKTQDKGERKHFFNEIKILRKELKEREEMAMSETLQKANVILATNTGASSDGPL
KLLPENHFDLVVIDECAQALEASCWIPLLKVRKCILAGDHKQLPPTIISHKAAAQGLSLS
LMERLIQKCGDRVVKMLTVQYRMHQAIMQWASTEMYDGHLSAHCSVAQHLLKDLPGVAPT
EETSIPLLLIDTAGCGLFELEVEEEQSRGNPGEVQLTGLHIDALIEAGVKAKDVAVIAPY
NLQVDMLRKHLYQKYPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAI
TRARRHVAVICDSCTISNHSFLKRLVEYMNTHGEVRTAFEYLDDIVPGNYTPKSSLGPPD
QEKKLKCSIGPVPKALGEKPKGRPAQKPRERLTKCSLENTGKVTTSDTKENENSFKHKAR
ILEFLDSGEVQLDFPSSLNAHDRMLIHQLAEEYGLQHVSTGEGSARHISIRRRDSPTELS
LGDTAACQPELIQGCPEEIDAGSEERGSGAGPDLKTLHVERIQRERKKKEERVKQSRESN
VNLQEIIGKKEKNVGGKASNKSKKEIAANEDFDAMISAAIKADNTCGFSKCKASVTTLGQ
LCQHCNRCYCLSHHIPEVHGCGEKAKANARQRISKEGILYPGSGMKDKSLDPTKRAHLQR
CLDQKLSELSKQRKSKRKDREK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtcggtagaagagtttgtgtcccggcaaatggagttgctaaaggaggaaaga
gaggccgaaatttccgaagcaagagcatggcaagaaggaatctccctgaaagagctgcag
cgcagaggagtttgcttactgaaacttgaactacattgtcaaaaaactgggctatacggc
catctgcttgtaactttacaaccgcaaaaacgtggcttagacacagaattaccttccaat
agttttgggcctggtgacatagtgggactttatgaagcagctggacaaaataatcaggtc
tgcacaggaattgtcacccggacggcctccaattcaattactatcgcagttgatgagcct
cagagtaaccttgtgagtttagatcaggagaatttgtaccgtctgttgaaacttgccaat
gatgttacatacaacagactcaaaagggctttaagtacacttaatcactatgggtccggt
ccagcatctgatcttattgatgtgcttttgtgttcttctgaacctagtggtgccagtgat
acaaagcttttgaagttctacgatgaatccctggatgcctctcagaaggaggctgtttgc
ttttcattggcacagaaggaacttgctatcatccatggaccacctggaaccggcaagacg
acaactgtggtagagataatactccaagctgtggagcaaggcttgaaagttctctgttgt
gctccctctaacattgcagtcgataacttggtggaaaggctctctgagcataaggtgcgg
atcctgcgtctgggtcgcccagctcgtctcctggagtccatacagcaccattcactggat
gctgtcctgttgcgtggagataatgcccagattgtagcagatatcaggaaagatattgat
caagcattcatgaaaaccaggaagactcaagacaaaggagagagaaaacatttttttaat
gaaattaagatactgagaaaggagctgaaggaacgagaagaaatggctatgtctgaaacc
ttgcaaaaagctaatgttattcttgctacaaatacaggtgcttcttctgatggtccgttg
aagcttcttcccgagaaccactttgatcttgtggtgattgatgaatgtgctcaagctctt
gaagcaagctgttggatcccactgctgaaggttaggaagtgtatcctggctggtgatcac
aaacagctgcctcccacaatcatctctcacaaggctgctgcacaaggtctttctcttagc
ttaatggaacggctgattcagaaatgtggagaccgtgttgtgaagatgctcacagtgcag
taccgaatgcaccaagctataatgcaatgggcttctactgagatgtatgacggtcatcta
tcagctcactgttctgtcgcacaacatttactgaaagacttgccaggagtggcccccaca
gaagagaccagtatcccattgctgcttatagatacagctggttgtggcttatttgaacta
gaagtggaagaagaacaatctagaggaaacccaggtgaggtacagcttaccggtttgcat
atagatgctttgatagaagctggtgtgaaagccaaagatgtagctgtcattgctccttac
aatcttcaggtggacatgctaagaaaacatctgtatcagaagtatccagagctggagatt
aaatcagtggatggcttccaaggaagagaaaaggaggcagtggttctttcttttgtaagg
tctaatagaaaaggtgaagtgggattcctcgccgaagacaggagaataaatgttgcaatt
acccgggcccgacgtcatgtggctgtaatctgtgactcttgcaccattagtaaccacagt
tttcttaaacggctggtggagtatatgaacacccacggagaagtgcgcacggcctttgaa
tacctggatgatattgtacctggaaactacactcccaagagttctttgggtccccctgac
caggaaaagaaacttaaatgcagcattggcccagtcccaaaggctcttggagagaaacca
aaaggaagacctgcccaaaagcctagagagaggctaacaaaatgttccctggaaaacacg
ggcaaagtcacaacatcagacaccaaagagaatgaaaactcatttaaacataaagcaaga
atcttggagtttctggatagtggtgaggtccaactggatttcccttcctctttaaacgct
cacgatagaatgcttatccatcagttggctgaagaatacgggctgcagcatgtgagcaca
ggagaaggcagcgcacgacacataagtattcggaggagagattctccaacagaattatct
ttgggagatactgcggcttgtcaacctgaattaattcaaggctgtccagaagaaatagat
gcaggcagtgaagagagggggagcggtgctggcccagacctaaaaacgttgcatgtggaa
cggatccaaagagagagaaagaagaaagaagagagagtgaaacaaagccgagaatccaat
gtaaatcttcaggaaataattgggaagaaagaaaaaaatgttggaggaaaggcatccaat
aaatccaaaaaggaaattgcagccaatgaagattttgatgctatgatctctgcagcaatt
aaagcagacaacacatgtggtttctccaaatgcaaagccagcgtaacaaccctgggacag
ctctgccagcattgcaacagatgctactgtctcagccaccatatcccagaggttcacggt
tgtggggagaaagccaaagcaaatgctcggcagagaatcagcaaggaaggaattctctat
cctgggagtgggatgaaggacaagtccttggatcctaccaagagagctcacctccagaga
tgcttggaccagaaactcagcgaactgtccaaacagcgaaagagcaaaaggaaagataga
gagaaataa
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