Ahaetulla prasina (Asian vine snake): 131185719
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Entry
131185719 CDS
T09329
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03030
DNA replication
apri03410
Base excision repair
apri03420
Nucleotide excision repair
apri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131185719 (RFC5)
03410 Base excision repair
131185719 (RFC5)
03420 Nucleotide excision repair
131185719 (RFC5)
03430 Mismatch repair
131185719 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apri03032
]
131185719 (RFC5)
03036 Chromosome and associated proteins [BR:
apri03036
]
131185719 (RFC5)
03400 DNA repair and recombination proteins [BR:
apri03400
]
131185719 (RFC5)
DNA replication proteins [BR:
apri03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
131185719 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
131185719 (RFC5)
Chromosome and associated proteins [BR:
apri03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
131185719 (RFC5)
DNA repair and recombination proteins [BR:
apri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
131185719 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
131185719 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_16
AAA_11
AAA_22
AAA_24
AAA_assoc_2
RuvB_N
AAA_14
DUF815
DEAD
ResIII
AAA_5
AAA_19
ATPase_2
AAA_30
TniB
PhoH
AAA_7
TIP49
DNAX_ATPase_lid
nSTAND3
Thioredoxin_6
Mg_chelatase
bpMoxR
Gp44_lid
AAA_3
NPHP3_N
AAA_28
Motif
Other DBs
NCBI-GeneID:
131185719
NCBI-ProteinID:
XP_058014493
LinkDB
All DBs
Position
15:complement(11575670..11603600)
Genome browser
AA seq
339 aa
AA seq
DB search
MERSAEAAATTVAGRSANLPWVEKYRPQTLGDLISHEDILNTIQKFISEDRLPHLLLYGP
PGTGKTSTILACAKQLYKEREFGSMVLELNASDDRGIDIVRGPILNFSSTRTIFKRGFKL
VILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPQL
MVPRLKHVIEKENVDVSDDGMKALVTLSNGDMRRSLNILQSTNMAFGKVTEETVYTCTGQ
PLKSDIANILDWMLNLDFTSAYRNIMELKTLKGLALQDILTEIHLFVHRVDFPTSVRIQL
LIKMADVEHRLAAGTNEKIQLGSLVAAFQVTRDLIAAEA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggaacgttcggcggaggcagcggcgacgacggtggccgggaggagcgcgaacttacct
tgggtagagaagtaccggcctcagactctcggggatctaatttctcatgaggacattctg
aataccatacagaagtttatcagcgaggatcgtttgcctcacctcctgctctatggacct
cccgggaccggcaagacatctacgattctcgcctgtgctaaacagctttacaaagagaga
gaatttggctcaatggttttagagctgaatgcttctgacgaccgaggcattgatattgtc
agagggcctatcctgaacttttccagcaccagaaccatcttcaagagaggctttaagctg
gtgattctggatgaagccgatgccatgacccaggatgcacaaaacgctctcaggcgtgtg
attgagaaattcaccgagaacacccggttttgcctgatctgcaactacctctccaaaata
attccagctctccaatccaggtgcaccaggttccggtttggccctttgacgccacaactc
atggttcctcggttgaagcatgttatcgagaaggagaacgttgatgtgagcgacgacgga
atgaaagccttggtgacactgtccaacggtgatatgcgcagatctctgaacatcttgcag
agcacgaacatggcttttggcaaagtgaccgaagagactgtctacacttgcacggggcag
ccgctcaagtctgatatcgccaacatcttggactggatgctgaatctggactttacttcc
gcctaccgcaacatcatggaactgaaaaccttgaagggcctggctttacaagacattcta
accgaaattcatttgtttgttcatcgagttgatttcccaacatctgttcggatccagctg
ctgatcaagatggcagatgtggaacaccgcctggccgcagggaccaatgagaagatccaa
ctggggtctcttgtagctgccttccaggtcacgagagatctgatcgcagctgaggcttga
DBGET
integrated database retrieval system
