Ahaetulla prasina (Asian vine snake): 131185909
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Entry
131185909 CDS
T09329
Symbol
SOX6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apri03000
]
131185909 (SOX6)
Transcription factors [BR:
apri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
131185909 (SOX6)
BRITE hierarchy
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
131185909
NCBI-ProteinID:
XP_058014896
LinkDB
All DBs
Position
1:269101180..269618517
Genome browser
AA seq
810 aa
AA seq
DB search
MSSKQATSPFASDGEGTTTQDLASQEQEDDNNEELVTSHLPLHTILHNKPHSEELPALVT
TIQPDSDWNSVISTQHRMESENNKLCSLYSFRNTSTSPHKPEESGRDRNELMTSVNFGTP
ERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT
PESLAEKERQLSAMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
QQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKP
GDNYPVQFIPSTMAAAAASGLSPLQLQQLYAAQLASMQVSPGTKMPSTPQPPNTTGTLSP
TGMKNEKRGTSPVTQIKDDAAQPLNLSARPKTAEPVKSPTSPTQSLFPTCKTSPVNVGNR
SGIPSPISATLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQQQQP
HIDGKLPSLNSMGLNNCRAEKIRDNYLPFFMEDIKKASVVLKGCSVPPKNRKTLWRTGGE
RIEERTRFENLGPQLSGKPSEDGKLGPGVIDLTRPEDAEGGATVAEARVYRDARGRSSSE
PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLS
KIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPIATG
TGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSIPVIQSTYSMKTDSGSLAGNEMINGE
DEMEMYEDFEDEPKSDYSSENEAHEAVAAN
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcaggccacctctccatttgcatctgatggagagggaacaacaacccag
gacttagcatcacaggagcaggaagacgacaacaatgaagaacttgtcacttcccatctg
cctctgcacaccatattgcacaacaaacctcactctgaagagctcccagctctagtcact
acaatccaaccagactcagactggaacagtgttatctcaactcagcataggatggagtca
gaaaataataagttatgttccttatattccttccgaaatacttctacctcaccacataag
cccgaagaaagtggtcgtgatcgcaatgagctaatgaccagtgttaattttggaactcca
gaacgccgcaaaggaagtcttgccgatgtggtggataccttgaaacaaaagaaactagag
gagatgacgagaactgaacaggaggattcatcttgcatggaaaaactactttctaaagac
tggaaggagaaaatggagagattaaacacaagtgaactccttggagaaataaaaggtacc
cctgaaagcttagcagaaaaagaacgacagctctctgccatgattacccagctcatcagt
ttacgggagcagcttctggctgcccatgacgagcagaaaaagctggcagcatcacaaatt
gaaaaacagcggcagcaaatggatctcgctcgccaacaacaagaacagattgcaagacaa
cagcagcaacttctgcagcagcaacataaaatcaatctcctgcagcagcaaatccagcag
gttcagggtcacatgcctcctctcatgatcccaatttttccacacgaccagcggacattg
gcagcggctgcagcagcccaacagggatttcttttccccccaggaataacttataaaccc
ggtgataactatcctgtgcagttcattccatcaacaatggcagctgctgctgcttctgga
ctcagccctttacagctccagcaactctatgccgctcagttggccagcatgcaggtatcg
cctggcaccaagatgccttccacgcctcagccgccaaatacgacagggacgctctcacca
accgggatgaaaaacgaaaagagagggaccagccctgtaactcaaattaaggatgatgct
gcacagccactgaatctctcggctagacccaagacagcagaacctgtcaaatccccgacg
tcgccaacgcagagcctcttccctacgtgtaaaaccagccctgtgaatgtgggcaataga
agtggaatccccagtcctattagcgcgactctgggaagaggatcttctctagacatcctt
tccagtcttaactcacctgccctatttggggaccaggacactgtaatgaaagcaattcag
gaggctcggaagatgagagaacaaatccagcgggagcagcagcagcaacagcagcaacca
catattgatggaaagcttccgtccttgaatagtatgggcctaaacaactgtagggctgaa
aagataagggataattatcttcctttcttcatggaagatataaaaaaggcttcagtggtc
ctgaaaggatgcagtgttcccccgaaaaatagaaagactctctggagaactggtggagag
agaatagaggaaagaacacgctttgagaatttaggcccacagctatcagggaaacccagt
gaagatggaaagctaggtccaggagtcattgatcttacaaggccagaagatgcagaagga
ggtgctactgtggctgaagctcgagtctacagagatgcccggggacgaagcagcagtgag
ccgcacatcaaacgaccaatgaatgctttcatggtttgggcaaaggatgaacgcaggaaa
attcttcaagcttttcctgacatgcacaactccaacattagcaaaattcttggttcccgc
tggaaatccatgtcaaaccaagagaaacaaccttattatgaagagcaagcacgattaagt
aaaattcacctagaaaaataccctaattacaaatataaacccagaccaaaacgcacttgc
attgttgatggcaaaaaactgcgcattggagaatataaacaactaatgagatctcgacga
caggagatgaggcaattttttaccgtagggcaacagcctcagattccaattgccacagga
acaggagtggtctatcctggtgctattactatggcaacaactacgccatcgcctcagatg
acctctgattgctccagcacttctgctagccctgagcccagcatccctgtcattcagagc
acttacagcatgaagacggacagtgggagcctggctggaaatgaaatgataaatggggaa
gacgagatggaaatgtacgaggactttgaggatgagcccaaatcagactatagcagtgaa
aacgaagcccacgaggctgtcgctgccaactga
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integrated database retrieval system
