Ahaetulla prasina (Asian vine snake): 131186049
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Entry
131186049 CDS
T09329
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apri03000
]
131186049 (RC3H2)
04121 Ubiquitin system [BR:
apri04121
]
131186049 (RC3H2)
Transcription factors [BR:
apri03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
131186049 (RC3H2)
Ubiquitin system [BR:
apri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131186049 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-CCCH
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf-C3HC4
zf-C3HC4_4
zf_CCCH_4
zf-C3HC4_2
zf-CCCH_UNK
Motif
Other DBs
NCBI-GeneID:
131186049
NCBI-ProteinID:
XP_058015239
LinkDB
All DBs
Position
16:complement(11000879..11037684)
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AA seq
1209 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCQSCLSKLHRKACPFDQTAIHTD
IDVLPVNFALLQLVGAQVPDRHALQLSNLGEDRHYEVAKKCVEDLALYLKPLSGSKGVAS
LNQSTLSRPMQRKLVTLVNCQLVEEEGRIRAMRAARSLGERTVTELILAHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIALEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLEFLANI
DPNPDAVSPTWEQLENATVAVKTVVRGLVDFIQNHSRKGPEIPQPQPNSKYKTSLCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKIGAATTRPFPLLGKASITSAIPPTAGNVISI
IGNTDPVGKAASSTNRSPSPESIGPQLIPRCINSPSLRTLEHMKKGGKAMANGQNPTLSP
NEPLPEHQTGSSLKTPVNQTSATSAGPVPPPPPPLPPSPALAGSEISPLAPKPSPFTARL
PIYPAHSESLPYFQDPRAHLSYEAPPYPQTGYYPGPPVVPAAVPPCLPRFVRSSSISESP
LPSASVPYSEHYSTFPARDRLTTAYQQAPPQPAYGPVPPVPSGMYAPVYDSRRIWRPPMY
QRDDIIRSNSLPPMEVTHPSVYHSFLRERYGSLDSYYSVPCQVPAEQRAIPWAKEPCGHL
KPTYEDPLRKKPEQWAPCHIPKMPLVTTSTVPAATPSPSSPSPLFCVDFSSEFSENSSSS
SDTKYEDGQLCQYSPWSCSTISSCISAVEAEPKDVLAKSTTILLDLDSGDPKRPAAYLFE
TQRKAKEEDPIIPFGDGPIISKWGAISRSSRTGYHTTDPVQATASQGSTTKPISMSDYIP
SISSVDLRWSCYASDSTSSAPFLERDQFVAPGESAPKKHSSTGDLLSTELQQAKSNSVLL
QREANALATQQNWDSLSEGSALTLKLLSKEMELRNGQADSPEDSMGAKSNRDIELELSSL
DTEEAEGPGEQMEEMLGLQLGTNGQNDNLFSGSALENGHPSEQPPMDIRQAKRPFLHEEL
ALLEKQKGVVPAASCFSQPTESSAGSRISLPIMTSSAGMRSLLLKTAHGIVEGQNDFLRP
ISNGKMVNT
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgcaggccgcccagtggacggagttcctgtcctgtcccatctgctataatgag
ttcgacgagaacgtgcacaagcccatcagcctcggctgctcccacaccgtctgccagagc
tgcctgagtaaactgcaccgcaaggcctgccctttcgaccagaccgccatccacactgac
atcgatgtgcttcccgtcaactttgcgctgctccagttagtgggagcccaggtgcccgac
cgccacgctctgcagctgagtaaccttggagaagacaggcactacgaggtggcgaagaaa
tgtgtggaagatctggccctttatttaaagccgctgagcggaagtaagggtgtggctagc
ttaaatcagagcacgctgagccggccgatgcaacggaagctggtgaccctggtgaactgc
cagctggtggaagaagaaggccgcatcagggccatgcgggcagctcgctccctcggggaa
aggaccgttaccgagctgatcttggcgcaccagaaccctcagcaactctcggccaatctc
tgggccgctgtccgggccagggggtgccagttccttgggccggctatgcaggaggaagcc
ttgaaactggtcctgctggcgctggaagacggctcggccctctcccgcaaagtcctggtg
ctgtttgtggtccagcgcctggagcccaggttccctcaggcgtcgaaaaccagcatcggc
catgtggtgcagctgctctatcgggcgtcctgcttcaaggtcaccaagagggacgaggac
tcctccctgatgcagctgaaggaggaattccgcagctacgaggccttgaggagggagcac
gacgcgcagatcgtccacatcgccctggaagccggtctgcggatttctcccgagcagtgg
tcctccctcctctacggcgacctggcccacaaatcccacatgcagtccatcatcgataag
ctccagtctccggaatcgtttgcgaaaagcgtgcaggaattaaccattgttctgcagcga
acaggggaccccgctaacctcaatcggctgcgtccccatttggaattcttggctaacata
gatcctaatccagatgcagtgtctccaacatgggagcagctggaaaatgccacggtggcc
gttaagactgtggtgcgtggccttgtggatttcatccagaaccacagcagaaaagggccc
gaaattccacagccgcagccgaacagcaaatataaaaccagcctgtgccgcgacctcaga
cagcagggcgggtgtccgcgcggaaccaactgcaccttcgctcactcgcaggaggagctg
gagaagtatcggttaagaaacaagaaaatcggtgccgccaccacgagacccttccctctg
cttgggaaagccagcatcacaagcgccatccctcctaccgcggggaatgtcatttccatc
ataggaaacacagacccggtgggaaaggcagcatccagcaccaacaggagccccagccca
gagagcatcggcccccagctgattccccgttgtatcaacagcccttcgttacggactctg
gagcacatgaagaaaggggggaaggccatggcgaatggccagaaccccactttgtctcct
aatgagcctctacctgaacatcaaaccggctcctctctgaaaacgcctgtgaaccagacc
tcagctacctcagcaggccccgttcctcctccccctcctcctcttcctccctcccctgcc
cttgcgggcagcgagataagccccctcgctcccaaacccagccctttcaccgctcgcctg
cccatctacccggctcactcggagagccttccctatttccaggatcctcgggctcacctc
tcctacgaagctccaccttaccctcaaacaggatactatccaggccccccggtcgtcccc
gcggctgtgccgccctgcctcccccgctttgtgaggtccagcagcatctcggaatcccct
ctcccgtcggcctctgtaccgtatagtgagcattacagcacatttcctgctcgggacaga
ctcaccactgcttaccaacaggccccgccgcagccagcctacggaccggtgccgccggtt
ccttccgggatgtacgctccagtttacgacagccggcgtatctggcgaccgccgatgtac
cagagggatgatatcatccggagcaattccttacctcccatggaagtcacccatccctcc
gtctatcacagctttctgcgggaaagatacggctctttggacagctactattctgtgccc
tgccaggtgccagcggagcagagggccatcccttgggcaaaggaaccttgtggacatctg
aagccgacctacgaggaccctctcagaaagaagccagaacagtgggctccttgccacatt
ccgaaaatgcccctggtgacaacatccacggttcctgcagccacaccttctccgtcatcc
ccttcccctctcttctgtgtggacttcagttctgaattcagcgagaactccagcagctca
agcgacaccaagtatgaagatgggcagctgtgccagtactcgccctggtcctgcagcacc
atcagttcgtgcatcagcgcggttgaggctgaaccgaaggacgtcctggctaaatccacc
acaatcctcctagatctggacagcggagaccccaagaggccggcggcgtacctctttgaa
acccagaggaaagccaaggaggaagaccccatcatcccttttggcgacgggccaatcatt
tccaagtggggcgccatctccaggtcatcgcggaccggctaccacaccacggatcctgtc
caggcaactgcttcccaaggaagcactaccaaacccatcagcatgtcagattatatcccc
agcatcagctcggtggacttgaggtggagctgctatgcgtccgattcgacttcctcggca
cctttcctagaacgggaccagtttgtcgctcccggggaatccgctcccaaaaagcactcg
agcaccggagacctcctgagcactgaattacaacaggccaaaagtaactcagtgctgctc
cagagagaggccaatgccctggctacgcagcagaattgggactccctgagcgaaggcagt
gccctcaccttaaagcttttaagcaaggaaatggagctgaggaatggccaggccgactcc
cccgaggacagcatgggcgccaagtctaaccgagacattgaactggaactttcgtcgctt
gacacggaggaggccgaggggccgggagagcaaatggaagagatgctgggcctgcagctt
ggcaccaatggtcagaacgataacctcttcagtgggtcagctctggagaatggtcaccca
tcggagcagcccccaatggacatcaggcaggccaagaggcctttcctgcatgaagaactt
gctcttttggagaaacagaagggagtcgtgccggccgcgtcctgcttcagccaaccgacg
gagtcctctgcaggcagcaggatctccctgcccatcatgacatcgtcggctggcatgcgc
agccttcttctcaaaacagcccatggcatcgtggaagggcagaatgactttttaaggccg
atttcaaacggcaaaatggtgaacacatga
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