Ahaetulla prasina (Asian vine snake): 131186137
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Entry
131186137 CDS
T09329
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131186137 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apri03041
]
131186137 (PRPF4)
Spliceosome [BR:
apri03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
131186137 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD_LRWD1
WD40_like
Ge1_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
131186137
NCBI-ProteinID:
XP_058015413
LinkDB
All DBs
Position
16:4150635..4170996
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AA seq
537 aa
AA seq
DB search
MALPRGSTGSHQNPRERLRFRTLDTGTKTKASDDGDAPPAKKAPIFYGSLEEKERERILK
GESGMMGKEAVKAAIEAGNINISTGEVFDLEDHISERQAEVLAEFERRKRARQINVSTDD
SEVKACLRALGEPITLFGEGPAERRERLRNILSVVGPDALKKTKKDDEKSKKSKEEYQQT
WYHEGPTTLKTARLWIANYSLPRAVKRLDEARWFKEVPEATRTSQKQELHKSLRSLNNFC
SQIGDDRPISFCHFSSNSKFLATACWSGLCKIWSVPDCKLILTLRGHNTNVGAIVFHPKA
TISLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDH
SWRLWDLEAQEEILHQEGHSKGVYDIAFHGDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG
HLKEIYGVSFSPNGYHIATGSGDNTCKVWDLRQRRCIYTIPAHQNLITGVKFEPNHGNFL
LTGAYDNTAKVWTHPGWSPLKTLAGHEGKVMGLDISMDGQLIATCSYDRTFKLWMAE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggctttgccgaggggctccacgggaagtcaccaaaatccacgcgagaggctccgtttt
cgcactcttgacactgggacaaaaacgaaggcgtccgatgatggagatgcccctcctgct
aagaaagcccccattttctacgggagcctggaggagaaagagcgcgaacggatcctgaag
ggggagtcggggatgatgggcaaagaagctgtcaaagcagccattgaggctggcaacatc
aatatctccaccggggaagtttttgacctggaagaccacatcagtgaacgtcaagcagaa
gtcctggccgaatttgagcggcggaagcgggcgaggcaaatcaacgtttccacggatgac
tccgaagtcaaggcctgcttacgagcgctcggagaacccataacgctgttcggggaaggg
ccagcggaaaggagagagaggctacggaatatcctctcggtcgttggtcccgacgccttg
aagaaaaccaagaaagacgatgagaaatctaagaagtccaaagaagagtatcagcaaact
tggtaccacgaagggccaaccaccttgaagacggcgaggctctggatcgcaaactactcc
cttccccgggcagtgaagcgcctggacgaagcccgatggtttaaggaggtccccgaagcc
acacgaacatcccaaaaacaagagcttcacaaatctttaaggtctctgaataacttctgc
agccaaattggggacgaccgtcctatttccttttgtcacttcagttccaactccaaattc
ttggccacagcctgttggagcggcctctgcaagatatggtcagtgccagactgcaaactc
atcctcactttgcgagggcataacaccaacgttggcgccatcgtcttccaccccaaagcc
accatctcattggacaagaaggacgtcaatctggcgtcttgcgctgccgacggctctgtc
aagctgtggagtctggaaagcgacgaaccagtggctgatatagaaggtcacacggtgaga
gtggctcgggtcacttggcatccctctggcagatttttgggcaccacatgctatgaccat
tcctggcgtttgtgggacctggaagcccaagaggagattctccaccaggaaggacacagc
aaaggagtctacgacatcgccttccatggggatggctccttagccggcaccggtggtttg
gatgcctttggccgcgtctgggacctgcgcaccggacgttgcatcatgttcttggaaggt
catctcaaagagatctacggggtcagcttttccccgaacgggtatcacatcgccactggc
agtggagacaacacctgcaaagtttgggaccttcgccagaggaggtgcatttacaccatc
cccgcccatcagaatctgatcaccggagtgaaattcgaacccaatcacggcaacttcctg
ctgaccggagcctacgacaacacggccaaggtgtggacccacccgggttggtctcccttg
aagaccttagccggacacgagggcaaagtgatgggcttggacatctccatggacgggcag
ctgatcgccacctgctcctacgaccggaccttcaagctatggatggcagaataa
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integrated database retrieval system
