Ahaetulla prasina (Asian vine snake): 131186273
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Entry
131186273 CDS
T09329
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04510
Focal adhesion
apri04512
ECM-receptor interaction
apri04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131186273 (TNC)
04518 Integrin signaling
131186273 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131186273 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
apri00536
]
131186273 (TNC)
Glycosaminoglycan binding proteins [BR:
apri00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
131186273 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
fn3
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
DUF7949
Pur_ac_phosph_N
Fn3_VIN3
NDNF
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
131186273
NCBI-ProteinID:
XP_058015688
LinkDB
All DBs
Position
16:complement(7222470..7303427)
Genome browser
AA seq
2050 aa
AA seq
DB search
MALSAWVVASVAIFLFHQDASGGLIKRIIRQKRETGINVTLPEDNQPVVFNHVYNINVPV
GSLCSVDLDTPSGDSEFKLPSEPGKHYQEHTLNEDNQIVFTHRINIPRRACGCVAAPDIK
ELLSRLEELEELVSSLQEQCGSGSTCCSSAQTAKGTIDATPYCSGRGNYSNDICGCICEQ
GWKGPNCSEPECPQNCNERGQCINGQCICDYGYTGYDCGELACPGDCNDQGKCVDGKCVC
FDGYAGDDCSLEVCLLPCSEYGSCVNGQCICMEGFTGVDCSQPLCLNNCNNRGRCVEEEC
VCDEGYTGEDCSELICPNDCYDRGRCINGTCYCEPGFTGEDCGDLACPNDCHRNGHCENG
VCVCDEGFIGDDCSLQRCPNDCHKQGRCIDGQCVCNEGFLGPDCGEVRCLNDCHNRGQCV
NGQCVCDEAFMGEDCSELRCPKDCNNHGQCVGGKCQCDEDYMGEDCGDLRCLHDCHYRGQ
CVKGQCVCDEGFVGEDCSQRRCPNDCHKRGKCVDGRCVCEEAFTGLDCNELRCPNDCNDR
GRCVDGQCICDKGYTAEDCSELTCPQDCNRRGRCVNGVCECNEGFLGEDCGELACINNCN
NRGRCLNGQCVCDEGFTGVDCGQRKCPDDCNNRGQCIDGVCLCDEGYKGPACAEQSCPNN
CNDLGHCVAGRCVCEEGFIGADCSDVSPPKDLTVTEVTDKTINLEWANENVVNEYLISYI
PTGTDGLELQFRVPGNKTSATIRELEPGVEYFIRVFAILRNKKSIPINARIATYLPAPDG
LKFKSVKETSVDVEWDAFNFPFHGWEIIFRSMKEEENGAIRSSLKSPQTTYLQQGLAPGQ
QYNVSLVVVKNEIRGPAVSKIVTTKLDAPSQIEAKDVTDTTVLITWFRPLAELDGLELTY
GPKDTPGDRTSIDLSEDEIQYSIGNLKPHVEYEVTLVSRRGLMTSDPITETFVTDLDAPQ
NLRRISQTDRTITLEWKNSQAMPDVYRIKYAPLSGGDHAEVTVPRSTQATSKVTLSGLRP
GTEYGIGVTSVKEDKESFPSTINAGTDLDSPKDLEIIDPTETAFTLRWKRPLAKIDRYHL
TYVTPLGKKSEIEIPADSTSHILRSLDAGTEYTIILVAEKGRLKSKPSTVTGSTEDEPEL
GNLSIAKVYWDGFYLTWTAADGAYESFVIQVRESNQPEDTRTLTLPGTQRSINLSGLSPS
TLYTITIYGITQGYQTKPIFVESTTGAKPEVGNLTVRAVTPESFNLSWTTAKGDFEIFTL
EIIDSNRLLEPMEYNISGSLRTAHISGLPPQTSFIVYLYGITRGLRTQALSITAVTELKL
QLGTFTLTNARLSEFSWTTRKEAFAHLTVNVRGLRRSQAPLKLAISEEVHDTFISEALPS
LENLTVSRINPYGFTVSWMASEDAFESFLVIVVDSGKLLDPQEFLLPGSQRQLTLKGLIT
GIGYEVLLYGLIHGRQTRPLSIVALTEAEPEVDHLLVSDATPNGFRLSWTADEGAFDSFV
LKIRDSNRLLDPLELIVPGHQRTQDIQGLKEGTEYYVDLYGVTSGRRSQPVNAIAMTAVG
SPKEISFSEITESSAVVSWKPPLTRVDSFRISYVPEPGDDLKSLTVDGNRSRIKLVDLIP
GVKYIVNVVAIKGFEESDPVSGFLLTELDSPSGLRVVNITDSKALAVWQPALAAVDEYLV
SYIAEGETEVTQRVSGNTMEYDLVGLRPATEYTLTIQAIKGPQRSRILSTKFITGPDAPR
SLTAADVQFETALLTWKPPQGSITGYLLIYESADGKIKEVVLGPESTSYTLVDLSSSTLY
TAKLQALLHTLKSNFIQTTFTTTGLLYPYPKDCSQTLLNGEIASGLYTIYLYGNQSQPVE
VYCDMSSDGGGWIVFLRRQNGEVNFYQNWRTYESGFGDPNNEFWLGLEKLHKITSQGPYE
LRVDLRDRGETAYALYNKFSVGDARTRYRLKVDGYSGNAGESMSYHNGRAFSTFDKDNDS
AITNCALSYKGAFWYRNCHRVNLMGRYGDNSHSQGINWFHWKGHEHSIPFAEMKLRPSNF
RNLEGRQKRA
NT seq
6153 nt
NT seq
+upstream
nt +downstream
nt
atggccctctccgcgtgggtcgtggcctcagtggccatctttctgttccatcaagatgct
agtggtggactcatcaagagaattattcggcagaagagggaaacgggaattaacgtgacg
ctgccggaggataaccaacccgtggtcttcaaccacgtctacaatatcaatgtccctgtg
gggtccctttgctctgtggacttggatactcccagtggagactcagaattcaaacttcca
tccgagccaggcaaacattaccaggagcacacactgaatgaagacaatcagattgtgttc
acgcaccgaatcaacatcccgcgacgggcttgcggctgtgtggcggcccctgatatcaag
gagctactaagccgactggaagaattggaagagctggtatcttctctgcaggaacagtgt
ggcagtgggtcaacgtgctgttccagtgctcaaacggcgaaaggtaccatcgatgctact
ccctactgcagtggccgtggaaactacagcaatgacatttgtggttgcatctgcgaacag
ggatggaaaggaccaaattgctcagaaccagaatgcccacagaactgcaacgaaaggggc
cagtgtatcaatggccaatgtatttgtgattatggttacacaggctacgattgtggagag
ctggcctgtcctggggactgtaacgatcaaggcaaatgcgtggatgggaaatgtgtgtgc
tttgatggttacgctggggatgactgcagcctcgaggtctgcttattgccctgcagtgag
tatggcagttgtgtgaatgggcaatgcatctgcatggaaggtttcactggggtggactgc
agccagcccctttgccttaacaactgcaataatcgggggcgctgtgtggaagaagagtgt
gtgtgtgatgaaggatacacgggagaggactgcagcgagctcatttgccccaacgattgc
tatgaccggggtcgttgcatcaacggcacctgctactgcgaacctgggttcactggtgag
gactgtggggacctggcctgtccaaatgactgtcaccgtaacggtcactgtgagaatggg
gtgtgcgtgtgcgatgaagggttcattggagatgattgttctctgcagaggtgtcccaac
gactgtcacaaacagggacgctgcatcgacgggcaatgtgtgtgcaatgaaggcttcttg
ggaccagactgtggggaggtgaggtgtctcaatgactgccacaatcgggggcagtgcgtg
aatggccagtgtgtgtgtgatgaagccttcatgggggaggattgtagtgaactaagatgc
cccaaggattgcaacaaccatggccagtgtgttggcgggaaatgtcagtgtgatgaggat
tatatgggggaggattgtggggatctgagatgcctccatgactgccactaccgtggccag
tgtgtcaaagggcagtgtgtgtgcgatgaaggctttgtgggtgaggattgcagccagcgc
aggtgtcccaacgattgccacaagcgggggaaatgtgtggatggccggtgtgtatgtgaa
gaagctttcactgggcttgattgcaatgaactgcggtgccccaatgactgcaacgaccgc
gggcgctgcgttgatgggcaatgcatatgtgacaaagggtacaccgctgaagactgctca
gaactgacctgtccccaggactgcaaccgtcgcggacgctgtgtcaacggggtatgtgaa
tgcaacgaaggcttccttggggaggattgtggggagctagcttgcatcaacaactgcaac
aaccgaggccgttgtctgaatggacagtgtgtctgcgacgagggcttcactggcgtagac
tgtggtcaacggaaatgccccgacgactgcaacaacagagggcagtgcattgatggtgtg
tgtctgtgtgatgaaggatacaaaggccctgcttgtgctgaacagtcctgccccaacaat
tgcaatgatcttggtcattgtgtagccgggcgatgtgtctgcgaagaaggcttcataggt
gccgactgttcagatgtatctcctccaaaggatttgacggttaccgaagtgacagataag
accattaacttggaatgggcgaatgaaaatgtcgtcaatgaatatctcatcagctacatt
ccgaccggcaccgatggcttagaacttcagttccgtgtacctggaaacaaaacatcagcc
accatccgggagctggaacctggtgtggaatacttcatccgtgtttttgccatcctaagg
aacaaaaaaagcatcccaattaatgcccggattgctacttacttgcctgcccccgatggc
ttgaagttcaaatcagtgaaagaaacttctgtggatgttgaatgggatgcctttaatttc
cctttccatggctgggagatcatctttagaagcatgaaagaggaagagaacggggccatc
cgaagcagtctgaagagccctcagacaacctacctacaacaaggtcttgcaccaggacaa
cagtacaatgtgtctctggttgtcgtgaaaaatgagatcagaggacctgctgtgtcaaaa
atcgtgaccacaaaactggatgcccccagccagattgaagcgaaggatgttacagacact
accgtcctcataacgtggttcagacccttagctgagcttgacgggctggagctgacctac
ggccccaaggatactccaggagaccgcacttccattgacctctccgaagatgaaatccag
tattccattggaaatctaaagccacacgtggaatatgaagtgaccctcgtgtctcggcgt
ggacttatgacgagtgaccccatcactgaaacttttgtcacagatctggatgctccccaa
aatctgaggcgcatttctcagacggaccgcacaatcactctggagtggaaaaacagccaa
gcgatgccagatgtctacaggatcaaatacgcccctctctctggtggagatcacgctgag
gtcaccgtgcccagaagcacccaggccacctccaaagttacactctccggcctgagaccg
ggcacagaatatgggattggagtaacttcggtgaaagaggacaaagagagttttccttcc
accatcaatgctggaactgatctggatagtcccaaggacttagaaatcattgaccctacc
gaaacggcttttactttacgttggaagagacccttggccaaaattgaccgctaccacctt
acttacgtcaccccacttgggaagaagagtgaaattgagattccagccgatagcacatcc
cacatcctccggtcacttgatgctgggacggaatacaccattatcctcgtggctgaaaaa
ggcaggctcaagagtaagccttccacggttaccggttctacagaagacgaacctgagctg
ggcaatttatcaattgcaaaagtgtactgggatggattctacctcacctggacagcagcc
gatggggcctatgagagttttgtcatacaggtgcgggagtccaaccaaccagaagataca
aggactctcactcttccgggcacacaacggtccataaatctctccggattgtcaccaagt
actctttacacaatcaccatctatggaataactcagggctaccaaacaaaacccatcttt
gttgaatctaccacaggggcgaaacccgaagttggaaacttgaccgttcgggctgtgacc
ccagaaagcttcaacctctcgtggacgaccgccaaaggagattttgagatctttaccctt
gaaatcattgattctaacaggttgcttgaacccatggaatacaacatttcgggcagttta
aggactgcccatatctcagggcttccccctcaaaccagtttcattgtctacctctacgga
atcacccgtggtctccgcactcaggcattaagcataactgccgtaacagaactcaagcta
cagttgggcacattcacactcacaaatgctcgtttgagcgagttctcctggactacaaga
aaggaagcttttgcacacttgacagtcaacgttagaggtctccgccgatctcaggcgcct
ctgaagttggcaatctcagaagaggttcacgacaccttcatctcagaagcattgccctca
ctggaaaacctcacggtttcccggattaatccgtacgggtttacggtatcctggatggca
tcagaagatgcctttgaaagctttctggtcatcgtggtggattctggcaagctgctagat
ccccaagaattccttcttcctggaagccagcgccaattaacccttaaagggctcataaca
ggcattgggtatgaagtccttctttacggcttgatccatggccgccaaacaagaccctta
agcattgttgccttaacagaagctgaaccggaagtagatcaccttttggtatcggacgct
acccccaatggtttccgtctgtcttggacagcggacgaaggagcctttgacagttttgtc
cttaaaatcagggattccaacaggcttttagatcctctggagttgatcgtgccaggtcat
caacgaactcaggacatccaagggctgaaagaagggaccgaatattatgtagatctctac
ggagttaccagcggacggcgttcacagcctgtaaatgcgattgctatgacagcagtggga
tccccgaaggaaatctctttctcagaaataacagaaagttcagctgtggttagttggaag
cctcccttgacacgggtcgacagtttccggatttcctatgttccagaacctggagatgat
ctcaaatctctgactgtggatggaaaccggagtagaatcaagctagtagacctgatccct
ggcgtaaaatatatcgtcaatgttgtggctatcaaaggatttgaagaaagtgaccctgtc
tctggctttctgcttacagaattggatagtccgtctggactgagggtggtaaacatcacg
gactccaaagctttagctgtttggcaaccagccctcgccgcagtagacgaatacctggtt
tcctatattgcagaaggagagacagaagtgactcagagggtttctggcaacaccatggaa
tatgatctcgttggccttcggccagctactgaatacaccctcacaattcaagccatcaaa
ggccctcagagaagcaggatcctctctaccaaattcatcacaggtcctgatgctcccaga
tctctgactgctgctgatgtccagtttgaaacagccctgctcacttggaagccaccccag
ggctctatcacaggctacctcctgatctatgaatccgctgatggcaaaatcaaggaagtg
gtcctggggcccgaatctacttcttacaccttggtggacttgagttcctccacgttgtac
acagcaaagctgcaggccctgctccacaccttaaaaagcaacttcatccaaactacgttc
accacaactgggcttctctacccttaccccaaagattgctcccaaactctgctgaatggg
gaaatcgcttctggactgtacaccatctatctctacggcaatcagtcacagcctgttgaa
gtctactgcgacatgagttctgacggaggcggatggattgtctttttgagaaggcagaat
ggcgaagttaacttctaccagaattggaggacttacgagagtggcttcggagaccccaac
aatgaattctggctaggactggagaaacttcacaaaatcacttcccaaggcccgtatgag
ctgagggtggacctgcgcgatcgcggagagactgcgtacgctctctacaacaagttcagc
gtgggggatgccaggacacgctatcggttaaaagtagatggctacagtggtaatgcaggt
gaatccatgagttaccacaacggacgcgcgttctccacctttgacaaggacaatgactcc
gccatcacaaattgtgccttatcctacaaaggggcgttctggtacagaaactgccaccga
gtcaaccttatgggtcggtacggagacaacagtcacagccagggaatcaactggtttcat
tggaaaggccacgagcattccattccgtttgcggagatgaagctacggccttccaacttt
aggaatttggaaggaaggcagaagagagcataa
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integrated database retrieval system
