Ahaetulla prasina (Asian vine snake): 131187626
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Entry
131187626 CDS
T09329
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri04140
Autophagy - animal
apri04148
Efferocytosis
apri05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131187626 (VPS18)
04148 Efferocytosis
131187626 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
131187626 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
apri04131
]
131187626 (VPS18)
Membrane trafficking [BR:
apri04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
131187626 (VPS18)
Hops complex
131187626 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-RING_UBOX
zf-RING_11
zf-RING_2
zf_RING_Vps8
DUF2229
zf-rbx1
zf-ANAPC11
PPR
PPR_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
131187626
NCBI-ProteinID:
XP_058018055
LinkDB
All DBs
Position
1:complement(305826903..305840635)
Genome browser
AA seq
975 aa
AA seq
DB search
MATILDEYVASLSHSTSSQQSRVNLGIPHTGYVNARLEKETPIFNKQRIDFTPPKKINSM
IVSSNQLCMSLGKDIIFRLDVAKADEPNQVELGRKDEASVYKLFLDHTGSHLIIALNSSE
CLYLNRSTQKIRLLSRWKGHLIESVGWNKIFGTEINTGPILVGTSQGQIYEAEISVTEGS
LFSTNLDQYFRLIYTLEEEAGPAPVCCLEIERGVDGKWFIIATTHKRLFQFVGKIPEGSE
PQAFGTIFSMPEDHLPGFREFPASLGYSEIAFYTPKLRSSPNAFAWMMGNGVLYGSLDYG
RPDSVLSDEQVWEYPSDVDTLANKPISIVLTQFHFLLLFPDRVKAVCTLNGQVVFQDVFL
EKFGSLKRMIKDPAFGQIWIHTEKVVFRYNIQRESRDVWKMYMNINKFDLAKEYCKDRPE
CLDIVLAKEAEYCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLASL
KQSETTQITLLTTWLTELYLNRLGVLEGDGSQQDLYEKTKENFRSFLSSPKIKDSLRNNR
STIHELLASHGDTDHMVYFAVIMNDYERVIAHYCQHENYNEALKVLSRIKNEELFYKFSP
ILIQHMPKKVVDAWIEMGKDLDAKRLIPALVTYSQSGSTQQINEAIRYMEFCVNELEETQ
EAIHNYLLSLYALCRPDSLLSYLEHAGTFADSIHYDLKYALRLCAEHSHHRACVHVYKVM
EMYEEAVDLALQVDVDMAKSCADLPEEDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
NLLKIEDVLPFFPDFVTIDHFKEAICNSLEAYNKHIEELKTEMEEATQSAERIRDDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVYPNLPAYKQAKLEDLQK
KMLAASQPSKSHHRHKDTADTLSQGKGQPSREQTKADIDDIVAAECVYCGDIMIRSIDKP
FIEPERYQEEMQSWL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggctaccattctggacgagtacgtggcctcgctttcccactccacctcctcgcagcag
agtcgtgtgaacctgggcatcccgcacacgggatatgtaaatgctcgcctggaaaaagaa
acaccaatttttaacaaacagagaattgacttcacacctcccaagaagattaatagtatg
attgtttcatctaaccaactgtgtatgagtcttggaaaagacataatatttagacttgac
gtagccaaggctgatgagcccaatcaggttgaacttggacgaaaagatgaagccagtgtt
tataagcttttcttggaccacacaggttctcatcttatcatcgccctgaatagcagtgag
tgtctctacttgaacagaagtactcaaaagatacggcttctttcccgttggaaaggtcat
ttgattgaaagtgtgggttggaataaaatttttggtacagagataaacactggccccatt
ttggttggaacatcacaaggccaaatatacgaggctgagatttctgtcactgaaggcagt
ctctttagtactaatcttgatcaatatttccgcctgatttataccttggaggaggaagct
ggtcctgccccagtctgttgccttgaaatagaaagaggagttgatgggaaatggtttatc
attgccaccactcataagagacttttccagtttgttggcaagattccggaagggtcagag
cctcaagcctttggcaccatatttagcatgcctgaagatcatttgcctggatttcgagag
tttccggctagtcttggctacagtgaaattgcattctacactcccaagcttcgttcttcg
cccaatgctttcgcttggatgatgggtaatggagtcttgtatggttctctggattacgga
cgtcctgattctgttctgagtgatgagcaagtgtgggaatatccttctgatgtagacaca
ctagccaataaacccatctccatagtgctcacccagtttcattttctgctgctttttcct
gatagagtgaaggctgtatgtactttgaatgggcaagttgtcttccaggacgtattccta
gaaaagtttggctcactaaagcgtatgatcaaagatcctgcatttggacaaatctggatt
cacaccgagaaagttgtgtttcggtataacattcagcgagaatcccgtgatgtgtggaag
atgtacatgaatatcaacaaatttgatttggctaaagagtactgtaaagaccgccccgag
tgcctagatattgtgctggcaaaagaagcagaatactgtttccaaaacaagagatatctg
gatagtgcaaagtgttatgcactgacccaaaattactttgaggagattgctcttaagttt
attgaagctaaacaggaagaggcactgatggaatttttgataaagaaactggctagcttg
aagcagtctgaaacaacacaaataactctgctgacaacttggctaactgaactatattta
aatcgcttgggagtgctggaaggggatgggtcacagcaagacctctatgagaagaccaag
gaaaacttccggagtttcttgagtagccccaaaatcaaagactccctccgcaacaatcga
tcaactattcatgagctgttggcaagtcatggggacacagaccacatggtatactttgct
gtcataatgaatgattatgagcgagtgatagcccattactgtcaacatgaaaattacaac
gaagcattaaaagtcctatccagaatcaagaatgaggaactcttttacaagttttctcca
attttgatccagcatatgcccaagaaagtggtagatgcttggattgaaatgggcaaggac
ttggatgccaagaggctaattcctgctcttgtcacctacagtcagagtgggagtacccag
cagatcaatgaggccattcgatacatggaattctgtgtgaatgagctagaagaaactcag
gaggccattcacaattatttgctgtcactctatgctttgtgtcggcctgactcattactg
tcctacttggaacatgctggaaccttcgctgacagtatccattatgacctgaagtatgca
cttaggctttgtgcagaacatagccaccaccgagcttgtgttcatgtttataaagttatg
gagatgtatgaagaagctgttgatctagctttacaggtggatgtagatatggcaaaatcc
tgtgcagatcttcctgaagaggatgaggagttaagaaaaaagctgtggttgaagattgct
cgtcatgttgtacaagaagagaaggatgttaagaaggccatggcttgcctttctagttgc
aatctgctgaagattgaagatgtgttgcctttcttcccagactttgtcaccatcgatcac
ttcaaggaagctatttgcaactctctagaggcctataacaagcacatagaggagctgaag
acagagatggaggaagccacccaaagtgctgaaaggatcagggacgacattcaggagatg
agaaacaaatatggctctgttgaaccacaagaaaagtgtgcagcgtgtgattttccactt
ctaaaccgtcctttttacctttttctttgtggccacatgtttcactatgattgccttcta
caggcagtttacccaaacttgcctgcctataagcaagctaagctggaagaccttcaaaag
aagatgctggctgcaagccagccttccaaatcccatcaccgccataaggatacagcagat
actcttagtcaaggaaaaggtcagccaagtcgagaacagacaaaagctgacatagatgat
attgtggcagctgaatgtgtgtattgtggtgacataatgatccgatccattgataagcct
ttcattgagccagagagataccaagaagagatgcagagctggttgtag
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