Ahaetulla prasina (Asian vine snake): 131187842
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Entry
131187842 CDS
T09329
Symbol
NRDE2
Name
(RefSeq) nuclear exosome regulator NRDE2 isoform X1
KO
K26109
nuclear exosome regulator NRDE2
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131187842 (NRDE2)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
131187842 (NRDE2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
Suf
Motif
Other DBs
NCBI-GeneID:
131187842
NCBI-ProteinID:
XP_058018516
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All DBs
Position
1:complement(330296599..330322114)
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AA seq
1153 aa
AA seq
DB search
MALFPAFGDAANAEGVQPSEGSNRDLNWLTNQSFCNEEALRLHQNVLENTHCAPPLQSNT
ATSFELPGENEANKSFQESPKKRKKKKKQRDHKKNKKKRRKEWTTSGSEVEDGRDDRNNE
KGGTELNLEEKNTNVPYSSTWLDDVQGLTTEGFRTDKKPDPANWQYKSLYRGNIARYKRR
SNFCLGLQPKEQHIIWESSAAEKTSSYKRPERYFTKGGRKLLNEEGIHVSGKNQDSSCGS
ASWIPILQLDPSEAPSTSWVNPLGIYDPQTTLWLQGKGPSAEHGLPNKQDPQENPQNVDS
PLMAKVEEYNCKVRENPRDVKAWMDLVSFQDELMRHPSCYAISDGEREMRKKSSKLILEK
KLAILERAIENNPNEVDLKLARLKLCIEFWEPSAVVKEWQKLIFLHPNNPALWQKYLLFC
QSQFSTFTVSKTHGCYGKCLSTLSAVNDGSMVSHPALPDTEEAMLAIFLQQCHFLRQAGH
SEKAVSLFQAMLDFTFFKPDNVKDLPTRGQREFFEPFWDSGEPRVGEKGAKGWKAWMHQQ
EKGGWVLINPPDEDEEDVDDEEEIKDRSLPKWQNWLHIERSREAKHWLPWRPEKNKKPSL
EDCEDPERQVLFDDLGPSLIRLSSPELQFQLFSSFLQFLGVPCSCRLLPSSFYIAMDENN
SFDNGYDDQGILTSLHMPLFGVSNIGHMDSVVQGEKHVTHSKEGEQFIQNLFHMMLPLFS
GKDRSNLCIFWLQYEITKVTQYLKMGKKKKLKLQGKKSKKLAKNLLKAPDNRNNVSLWQL
YAYLEWLLGNIEDARKVFDTSLGMAGISGIQNPQFCHLSLLYAKLEAELLINLEGAVESR
ATYILIKLAERGQYVPYQGHVSAVNVLKARKMYERLVQDCLTENLTSDQEHASGSSHLIG
LVGCYTLFQYLTLGIDSAMSVYRQVSQKLKDKDPGERLTGQHFTMPLEAISLMHVSLLRF
HMKISVYPLSPLREVLLEVLKRYPSNQSFWSSYIQIQSKSHNASKARRFFDAVTRTTQSL
EPWLFAIQVEQMRKKLIERVQREPTGDVYATIPEIGLTNRIKALFEHAMQTENGAHCPLL
WRLYICFMVSLGDRAKSKGIFYRALQNCPWAKVLYMDAMEYFPDELQENLDLMAEKELRV
RVPIEELELLLED
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggctctttttcctgcttttggcgatgctgctaatgccgagggcgtacaaccaagcgaa
ggctcgaacagagatttgaactggctgacaaatcaaagtttctgcaatgaagaagcactg
agattgcaccaaaatgttttagaaaatactcactgtgctcctccgctccaaagcaataca
gccaccagttttgaacttcctggagaaaatgaagccaacaaaagttttcaagagtcacct
aaaaaaagaaagaaaaagaaaaagcaacgagatcacaagaaaaataaaaagaaaagaaga
aaagaatggaccactagtgggtctgaagttgaggatgggagagatgatagaaataatgaa
aaaggaggaacagaattgaacttagaagaaaaaaacacaaatgtgccctattcctctact
tggcttgatgacgttcagggtttgacaacagaaggattcagaacagataagaagccagac
cctgcaaattggcaatataagtcattatatcgaggcaacattgcaaggtataagagacga
agcaacttctgccttggccttcaacctaaggaacaacatattatttgggagagctcagca
gcagaaaaaacatcttcctataagcgaccggaacgctacttcacaaaaggtggtcggaaa
ctcctgaacgaagaaggcattcatgtcagtggtaaaaatcaggattcctcatgtggctca
gcctcctggataccaattttgcaactagatccatcagaggctccttctacaagctgggta
aaccctcttgggatttatgatccgcagaccacgctgtggctacaaggaaaagggccctct
gctgaacatggcttaccaaataagcaagaccctcaagagaacccccagaatgtagactcc
cccctaatggcaaaggtggaagaatataactgcaaagtcagagagaatcccagggatgtc
aaagcatggatggatttggtttcttttcaggatgagctcatgagacatcctagctgttat
gctatcagtgatggagaacgggaaatgagaaagaaatcatccaagctaatactagagaag
aagctggctattttggaaagagcaatagaaaacaacccaaatgaagtggacctgaaatta
gcacggctaaaactttgcatagagttctgggagccatctgctgtggtgaaggaatggcaa
aagttgattttcttgcacccaaacaacccagccctgtggcagaaatatctcttattctgc
caaagtcagttcagcacctttactgtctctaaaacacatggctgttatggaaaatgcctg
agcacgttatcagctgtgaatgatggcagtatggtgtcccatcctgcactgccagacaca
gaggaagccatgctagccatttttcttcagcagtgccatttccttagacaggctggccat
tcggaaaaagctgtgtccctgttccaagccatgcttgactttaccttttttaaaccagat
aatgtcaaagatctgccaacaagaggacagagggaattctttgaacccttttgggatagt
ggagagcctcgagttggagaaaaaggagctaaaggttggaaggcctggatgcaccaacaa
gagaagggaggctgggtgctcatcaacccacctgatgaagatgaggaagatgtagacgat
gaagaagaaataaaagatagatctctaccaaaatggcaaaactggcttcatattgaacgt
tcccgggaagcaaaacactggttgccctggcgtccagaaaaaaacaagaaaccgtcatta
gaagattgtgaagatccagagaggcaggtcttatttgatgaccttggaccatcattgata
agactttccagccctgaacttcagtttcaactattctcctcatttttgcaattcttagga
gttccatgcagctgtagacttttgccttcttccttctatatagcgatggatgaaaataac
tcatttgacaatgggtatgacgaccaaggaattctgacttctttgcatatgcctcttttt
ggagtcagtaatattggtcatatggattcagtggtccaaggagagaagcatgtgactcac
tctaaggaaggagagcaatttattcagaatctttttcatatgatgctgcccttattttca
ggcaaagacagatctaacctatgcattttttggcttcagtatgaaatcactaaggtcact
cagtatttgaaaatgggaaagaaaaagaaactaaaattgcaaggcaagaaaagcaaaaaa
ttagctaaaaatcttcttaaggcacctgacaacagaaataatgtttcactttggcaacta
tacgcttacctggagtggctacttggcaatatagaagatgctagaaaagtttttgataca
tctttggggatggctggaatcagtggaatccaaaacccccaattctgtcatcttagcctt
ctttatgctaaactggaagcagaattactaataaatctagaaggagctgtagaatcacgt
gcaacatacatattgatcaaactggctgaaaggggacagtatgttccttatcagggacat
gtatcagcagtgaatgttctgaaagctcggaaaatgtatgaacgcctagttcaagattgt
ttaactgaaaacctcacttctgatcaagaacatgctagtggttccagccatctgattggc
ttggttggttgttacactcttttccaatatttaactcttgggattgactctgcaatgtca
gtatatcgtcaagtttctcaaaagctaaaagacaaggatcctggagaaaggcttaccggt
caacatttcactatgcctcttgaagccatctccctcatgcatgtaagcttgctcaggttc
cacatgaaaatcagcgtgtatcctttgagtcctcttcgtgaagtactcttggaggttttg
aagagatatcccagcaaccagtctttttggagctcatacatccagatccaaagcaagtct
cacaatgctagcaaagcccgacggttttttgatgctgttacaagaactacacaatcgctg
gagccttggctgtttgcaatccaagtggagcaaatgaggaaaaaactaattgaaagggtc
cagagggagccgactggagatgtgtatgcaaccattcctgaaattgggttaacaaatcga
atcaaagctttatttgaacatgcaatgcagactgaaaacggtgctcattgtccattgctc
tggaggttgtatatatgcttcatggtttctttgggagatcgggcaaaaagtaaaggcata
ttttacagagcacttcaaaactgtccctgggcaaaagtgttatatatggatgctatggaa
tactttccagatgagctgcaagagaacctcgatcttatggctgagaaagaactgcgagta
cgggtcccaatagaagaattggagctgctgcttgaagactga
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