Ahaetulla prasina (Asian vine snake): 131188194
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Entry
131188194 CDS
T09329
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03018
RNA degradation
apri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131188194 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
131188194 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131188194 (LSM4)
03041 Spliceosome [BR:
apri03041
]
131188194 (LSM4)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131188194 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
131188194 (LSM4)
Spliceosome [BR:
apri03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
131188194 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
131188194
NCBI-ProteinID:
XP_058019249
LinkDB
All DBs
Position
1:complement(359734043..359746091)
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AA seq
139 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGIGGPGRGVFGGRGRGGI
PGSGRGQQEKKPGRQAAKQ
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcttccactatccttgctgaaaacggcacagaaccacccaatgctggtggaactcaaa
aatggtgaaacgtacaacggtcacttggttagctgtgataactggatgaacatcaatctt
cgagaagttatctgtacatcaagggatggagacaaattctggaggatgcctgaatgttac
atccgtggcagcaccatcaaatacctgcgtattcctgatgagatcattgatatggtgaaa
gaagaggtggtctccaaaggcaggggccgtggtgggatgcagcaacagaagcagcagaaa
ggtcgtggcattggtggccctgggcgaggagtgtttggaggtcgtggtcgaggaggaatc
ccagggagtggtcggggacagcaagaaaagaagccagggagacaggcagcaaagcagtga
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integrated database retrieval system
